Gene Tbd_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2078 
Symbol 
ID3672250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2171517 
End bp2171837 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content62% 
IMG OID637710781 
Productprotein translocase subunit yajC 
Protein accessionYP_315836 
Protein GI74318096 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.459618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCGC TCGCCCACGC CCAGACTGCC GCTCCCGCCG CCACGCCGGG AATCGCCGAT 
TTCCTGCCGC TCATCATCAT CTTCATCCTG TTCTGGTTCA TGCTGATCCG CCCGCAGATG
AAGCGCACGA AGGAACAGAA GAAGATGCTG TCGGAACTCG CGAAGGGCGA CGAAGTCGTC
ACCGCGAGCG GCCAGGTCGG CAAGATCGCC AAGATCGGCG ATCAATACGT GTCGCTCGAA
ATCGCCGACG GCGTCGTCGT CCACGTGCAG AAGCAGTCGG TCCAGACGCT GCTGCCGAAG
GGCACGATCA AGGGGCTCTA A
 
Protein sequence
MISLAHAQTA APAATPGIAD FLPLIIIFIL FWFMLIRPQM KRTKEQKKML SELAKGDEVV 
TASGQVGKIA KIGDQYVSLE IADGVVVHVQ KQSVQTLLPK GTIKGL