Gene Tbd_2065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2065 
Symbol 
ID3672236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2157499 
End bp2159373 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content67% 
IMG OID637710767 
Productpotassium uptake protein 
Protein accessionYP_315823 
Protein GI74318083 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3158] K+ transporter 
TIGRFAM ID[TIGR00794] potassium uptake protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCAGC CTCACAGCGT CCCAAATACG CGTGCGCTCG CCCTCGGCGC GCTCGGCGTG 
GTGTTCGGCG ACATCGGCAC CAGCCCCCTC TACACGATGA AGGAGGTGTT CGGCGGTCAC
CACCTCGCCC TGACCCAGGA CAATGTGCTC GGCATCCTGT CGCTGATCTT CTGGGCCCTG
ATCCTGGTCG TGTCGCTCAA GTACGTCCTC GTCATCATGC GTGCGGACAA CAAGGGCGAA
GGCGGCATAC TGGCGCTGCT GTCCCTGGTC CAGGGGCAGG CGCCGCTGCG CTCGAGAGCC
CGCTGGATCA TCATGTCGCT GGGTTTTCTC GGTGCGTCGC TGTTCTTCGG CGACAGTCTC
ATCACACCGG CGATCTCGGT GCTGTCGGCG GTCGAGGGGC TCGAGATCGG CGCGCCGGCC
TTGCATCCCT TCATCCTTCC GCTCGCCCTC GGCATCCTCG TCGGCCTGTT TGCGATCCAG
CGCCGCGGGA CGGCAAGCAT CGGGCGGCTG TTCGGGCCGA TCATGCTGCT CTGGTTCGCG
GTCCTCGGCG TGCTCGGTGC GATCGGCATT GCCAAACATC CCCAGGTGCT CGCGGCGCTG
CTGCCGATTC ATGCGATCCA GTTTTTCATG ACCCACGGCA CGGCGGGTTT CCTGATCCTC
GGTGCGGTGG TCCTCGCGAT CACGGGCGCC GAGGCGCTCT ATGCGGACAT GGGCCATTTC
GGCACGCGGC CGATCCGTCT GACGTGGTTC GGCTTCGTGC TGCCGGCGCT GGTCGTCAAT
TACTTCGGCC AGGGCGCGCT GCTGCTGGCC GAGCCCGCGG CCGTGCGCAA TCCGTTCTAC
ATGCTCGCGC CCGACTGGGC CTTGTACCCG ATGGTCGCGC TGGCCACGGC GGCGACGGTG
ATCGCGTCCC AGGCGGTCAT CTCGGGCGCC TTCTCGGTCA CCCGGCAAGT GGTGCAGATG
GGCTACGCTC CGCGGCTCGT GATCCGCCAC ACGTCGGCGA CGGCGGCGGG GCAGATCTAT
ATTCCCTTCG TCAACTGGAC GCTGGCGGCC GGCGTCGCGC TGCTCGTGCT CGGCTTTCAA
AGCTCGAGCA ATCTCGCCGC GGCCTACGGC ATCGCCGTGA CGGCGACCTT CGCCATCGAC
ACCGTCCTGC TCGCGCTGCT CATGCGCGTC AACTGGAACC TCGGGCGCGC GCCGACGCTG
GTCGCAGCGG CGTTGTTTCT GACCCTCGAT CTCGCGTTCT TCGGCGCGAA TGCGGTGAAG
ATCCCCGAAG GCGGCTGGTT TCCGCTGGTC GTGGCGGTCG TCGTGTTCAC GATCCTCGTG
ACCTGGAGAC GGGGTCGCGA AATCGTCGGC GCGCGCCTGC ACGAGCGCGG GCTGCCCCTC
GCGCCGTTCG TCGAATCGCT GCTGGCGCAT CCTCCGGCGC GGGTCGGGGG CACGGCGGTG
TTCATGACGA CCGACCCGAG CGGTGTGCCC CTGGCGCTGC TGCACAACCT CAAGCACAAC
AAGGTTCTGC ACGAGCGGGT GGTGATCCTC AACGTCCGTT ATGGCGAGGT GCCCTACGTG
CCGGCCGAGC ACCGGCTCGC GGTGACGAAG CTCGGCGAGG GCGTGTTCCA CGTCGTCGTG
CGCTACGGTT TCATGGACGA CGTCGACATT CCAAAGGCGC TGGCCGAATG CCCTTGCGGC
ATGGATTTCG ACATGATGGA TACAACCTTC TTCCTGAGCC GGGAGAACCT GATTCCCGCG
CGCGGCGACG GCGGGATGAT GGTGTGGCGC GAGCACCTGT TCGCAACGAT GGCGCGCAAC
GCGGCAAGCC CGATGACCTT TTTCCGGATT CCGCCGAACC GCGTCGTCGA GCTCGGCGCG
CAGCTCGAGA TCTAG
 
Protein sequence
MSQPHSVPNT RALALGALGV VFGDIGTSPL YTMKEVFGGH HLALTQDNVL GILSLIFWAL 
ILVVSLKYVL VIMRADNKGE GGILALLSLV QGQAPLRSRA RWIIMSLGFL GASLFFGDSL
ITPAISVLSA VEGLEIGAPA LHPFILPLAL GILVGLFAIQ RRGTASIGRL FGPIMLLWFA
VLGVLGAIGI AKHPQVLAAL LPIHAIQFFM THGTAGFLIL GAVVLAITGA EALYADMGHF
GTRPIRLTWF GFVLPALVVN YFGQGALLLA EPAAVRNPFY MLAPDWALYP MVALATAATV
IASQAVISGA FSVTRQVVQM GYAPRLVIRH TSATAAGQIY IPFVNWTLAA GVALLVLGFQ
SSSNLAAAYG IAVTATFAID TVLLALLMRV NWNLGRAPTL VAAALFLTLD LAFFGANAVK
IPEGGWFPLV VAVVVFTILV TWRRGREIVG ARLHERGLPL APFVESLLAH PPARVGGTAV
FMTTDPSGVP LALLHNLKHN KVLHERVVIL NVRYGEVPYV PAEHRLAVTK LGEGVFHVVV
RYGFMDDVDI PKALAECPCG MDFDMMDTTF FLSRENLIPA RGDGGMMVWR EHLFATMARN
AASPMTFFRI PPNRVVELGA QLEI