Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2024 |
Symbol | |
ID | 3672195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2113479 |
End bp | 2116157 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637710726 |
Product | long-chain fatty-acid-CoA ligase |
Protein accession | YP_315782 |
Protein GI | 74318042 |
COG category | [C] Energy production and conversion |
COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
TIGRFAM ID | [TIGR02717] acetyl coenzyme A synthetase (ADP forming), alpha domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGC ATTATCTCGA ACCTCTCTTC AACGCGAGCT CGGTCGCGGT CTTCGGCGCC AGCGAGCGTG AAGACTCGGT CGCCGGGACG CTGTTCCGCA ACCTGCGCCA CGCCGGCTAC AAAGGCGAGG TCTATCCGAT CAACCCTAAG CATGCGGAGA TTTTTGGCGA ACGCTGCTAT GCGCGGGCGA GCGAATTGCC CGCCACGCCA GAACTCGCGC TGATCGCAAC GCCGGCCACC ACCGTGGCGG CGATACTCGA AGAATGCGGG CAGCGCGGCA TCCGCCATGC GATCGTGCTG TCGGCCGGCT TCGCCGAGAC CGGCACGCAG GGGATTGAAC TCGAGGCGGG CTTGCAGCGC GTCGCGAAGC AGCACGGAAT TCGCTTCATC GGCCCGAACT GCCTCGGCAT CCAGCGCCCG GCCATCGGCC TCAACGCGAC CTTCAGCCAG GGCGCGACGC AGGCCGGCGA CCTCGCGCTG GTCTCGCAGT CGGGCGCCTT GTGCACGGCG ATGCTCGACT GGGCCGAAGC CAACGGCATC GGCTTTTCGA GCGTGGTGTC GACAGGCGCC TCGGCCGACC TCGATTTCGG CGAAATCCTC GATTACCTCG CCTACGACCG GCAGACCAAG GGCATTCTTC TGTACATCGA GGGCATACGC GACGCGCGCC GCTTCATGAG CGCGCTGCGC GCGACGTCCC GCTTCAAGCC CATCGTCATG GTCAAGGTCG GGCGGCACGA GGCCGGCTCG CGCGCCGTGC AGTCGCACAC CGGCGCGCTC GTCGGCTCCG ATGCCGTCTT CGACGCGCTC GTGCGGCGCG CCGGCGTCGT CCGCGTAAAC ACGATCCTGC AGCTCTTCGC CTCCGCGCGC GCGCTCGCGA CCCATATCCA GCCGTCCGGC AATCGCCTCG CGATCGTCAC CAACGGCGGC GGGCCGGGCG TCATGGCGAC CGACCTCGCC GTCGACGTCG GGCTACGCAT GGCCGAGCTT TCGCCGGCGA CGATCGCGGA ACTCGACGCG GTGCTTCCGG CGACCTGGTC GCGCGGGAAC CCGCTCGACA TCATTGGCGA CGCGACGGCG GAGCGCTACC GTGCAGCCGT CGGCGCCTGC CTGCACGACA ACAACGTCGA CGGCGTGCTC GTGATGCTGA CGCCTCAGGC GATGACCCGG CCGACTGCGG TCGCCGACGC GGTCATCGAC GTTGCCAAGC AGGCGCCCAA GCCCGTGCTG ACCTGCTGGA TGGGTGAAGC GCAGGTGCAC GAGGGACGCC AGCGCTTCAA GCAGGCGGGC ATTCCCTACT TCACCACGCC CGAGCCGGCG GTCGAGGTCT TTTCCTTCCT CGCGGCCTTC TACGAGAACC AGCGCCAGCT CATGCAGACG CCGGGGCCGC TTTCGCACCA GCTTGAGCCC GACGTCGAAG GCGCGCGCCT GATCATCGAG AGCGCACTCG CCCACGGCCG TCATCTGCTG AACGAGGTCG AATCGAAGGC GCTGCTGTCG GCCTTCCGCA TTCCGATCGC GCAGACGCTG ATCGCGCGCG ACCCGATGGA GGCGATGCTG ACCGCGCAGC AGATCGGTTT TCCGGTGGCG ATGAAGATCA ATTCGCCCGA CATCACCCAC AAATCGGACG TCAATGGCGT GCGTCTCGGG CTCTCGAGTG GGCACGCGGT GCGCTCGGCC TTTGGCGAGA TGCTCGCCGA CGTCAAGCGG CTTCGGCCCG AGGCGCGGCT GGAGGGCATC GTGATCGAGC CGATGGTGAC GCGGCCGCAC GCGCGTGAAG TCCTGCTCGG CATGACCTCG GATCCGGTGC TCGGCCCGGT GATCGTGTTC GGCGCCGGGG GCGTCGACGT CGAGGCCTTC CAGGACCGGG CGGTCACGCT GCCGCCGCTC AACACCTACC TCACGCGCGA CCTCATCCGC CGTACCCGCG TCGCGACCCT GCTCGGAAGT TTTCGCAACC GCCCGCCGGT CGACATGGCG GCCCTCGAAA ACGTGTTGTT GCGGCTCTCG GAAATGGTCT GCGAATTGCC CTGGCTCGCC GAGCTCGACA TCAACCCCTT GCTGGTCGAC GAGGGCGGCG CGCTCGCGCT CGACGCTCGC ATCGTCATCG CGCCGCGCGT GCCCTCGGCC GATCGCTATG GCCACATGGC GATCCATCCG TATCCGGCGC ATCTGGTCAC GCACTGGCAG TTGCCGAGCG GCCACGACGT GCTGATCCGC CCGATCCGTC CGGAGGACGC GGAATTGACG CAGGGCTTCG TGCGCAGCCT GTCCGAGGAG AGCCGCTATT TCCGCTTCAT GGACGCGGTG AGCGAGCTGT CGCCGGTGGC GCTCGCACGG CTCACCCAGA TCGATTACAC GCGCGAGATG GCGCTTCTGG CGCTCACCGA GATTGACGGT CGCGAGGTCG AGCTCGGCGT CGCGCGTTAC GCCGTTAATG CGGACGGGAC CTCGTGCGAG TTCGCGCTCG TCGTCAGCGA CGCCTGGCAA AAACAGGGCA TCGGCCACAA GCTCATGGAC GTGCTGATGG ACGTCGCGCG CGGCCGCGGG CTGCGTCTCA TGGAAGGGGA GGTGCTGAAG GCCAACCGTC CGATGCTGAA GCTGGTGGGA AGCCTCGGCT TTCGCATCGA GCCTCACCCC GAGGACGAGG CGGTGCGCCG GGTTTCGCGT GCGCTCTGA
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Protein sequence | MPQHYLEPLF NASSVAVFGA SEREDSVAGT LFRNLRHAGY KGEVYPINPK HAEIFGERCY ARASELPATP ELALIATPAT TVAAILEECG QRGIRHAIVL SAGFAETGTQ GIELEAGLQR VAKQHGIRFI GPNCLGIQRP AIGLNATFSQ GATQAGDLAL VSQSGALCTA MLDWAEANGI GFSSVVSTGA SADLDFGEIL DYLAYDRQTK GILLYIEGIR DARRFMSALR ATSRFKPIVM VKVGRHEAGS RAVQSHTGAL VGSDAVFDAL VRRAGVVRVN TILQLFASAR ALATHIQPSG NRLAIVTNGG GPGVMATDLA VDVGLRMAEL SPATIAELDA VLPATWSRGN PLDIIGDATA ERYRAAVGAC LHDNNVDGVL VMLTPQAMTR PTAVADAVID VAKQAPKPVL TCWMGEAQVH EGRQRFKQAG IPYFTTPEPA VEVFSFLAAF YENQRQLMQT PGPLSHQLEP DVEGARLIIE SALAHGRHLL NEVESKALLS AFRIPIAQTL IARDPMEAML TAQQIGFPVA MKINSPDITH KSDVNGVRLG LSSGHAVRSA FGEMLADVKR LRPEARLEGI VIEPMVTRPH AREVLLGMTS DPVLGPVIVF GAGGVDVEAF QDRAVTLPPL NTYLTRDLIR RTRVATLLGS FRNRPPVDMA ALENVLLRLS EMVCELPWLA ELDINPLLVD EGGALALDAR IVIAPRVPSA DRYGHMAIHP YPAHLVTHWQ LPSGHDVLIR PIRPEDAELT QGFVRSLSEE SRYFRFMDAV SELSPVALAR LTQIDYTREM ALLALTEIDG REVELGVARY AVNADGTSCE FALVVSDAWQ KQGIGHKLMD VLMDVARGRG LRLMEGEVLK ANRPMLKLVG SLGFRIEPHP EDEAVRRVSR AL
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