| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2023 |
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| Symbol | |
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| ID | 3672194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2111574 |
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| End bp | 2113472 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710725 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_315781 |
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| Protein GI | 74318041 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAGC TCGACCAACT AAAACTCAGT GGGCAGTTGC CTTCGCCGCG CGGCGTCGCG
CTCGCCGTGC TCGAGTTGTC GCGGCGCGAC AATGCGACGC TCGGCGAAAT CGCGCGCGTC
GTACAGACCG ACCCCGCGCT GTCCGGGCGC CTGATCAAGC TCGCCAATTC GGCTTCGCAC
ATCGCGCGTC CCGTGGTCTC CGTGCAGGAA GCCGTGGTGC GTCAGGGCAT GTCGACGGTG
CGCCAGCTCG CGCTCGGATT TTCGCTTCTC GATCAGTTCC GGAACGGCGC CTGTACGGCC
TTCGACTATC AGGAATACTG GTCGCACTCG CTGCTCATGG CGCTGTCGCT GCAGGCGCTG
GGCGCCCGCG TCCACGTCGC GGCGGCCGAC GAATTGTTCA TCTGCGGCCT GCTCGCGCAA
GTCGGGCGCC TCGCACTCGC GACGGCCTAT CCCGCCGAGT ACGACGCCGT CCTGCACGCC
CATCGCACCG ATCCGTCGAA GTCGCTGATC ACGCTCGAGC GCTCCCGCCT CGAAATCGAC
CACATCGAAC TCGGGATCGT GATGATGACC GACTGGGGCA TGCCGCGCGT CTTCACGATT
CCGCTCGCGC ACTACCAGGA CCCGGAATAC ACGAGCTTTC CGCACGACTC GCGCGCCAAC
AGCCTCATGC TGATGCTGCG CCTGTCCCAC CGGCTGGCCG ATCTCGCCTT GGGTAGCGCC
GACGGGCGCA TGCAGCTGGC GCGCGAGTGG ATGACACTCG CGACCGAACT CGACCTCCCG
CCGGAAAACG CCGGCAGCTT CATCGACGAG GTGATCGCGC AATGGCACGA CTGGGGCGCG
CTCCTGAAGA TCCCCACCTC GGTCCTGCCG CCGTTCGCCG AGATCAGCCA CGGCAGCGCC
GAGGCGAGCG ACGACGAGGC GCCGCTGCGC ATCGTCGTCG CCGACGGCAA TGCCTTCACG
CGGCGCAAGA TCATGGCCTT GCTCGTCGAG GACAGCGGCC ACGTCGTCTA TCCGGCCGAT
AACGGCAATA GCGCGCTCGC CCTGGCGATG GAGGTGTTGC CGCACGTTAT CATCGCCCAC
ATCAACCTGC CGCTGCTCGA CGGACTCGAG CTGTGCCAGG CCTTGCGCGC GACCGATGAG
GGCCGTCGCA TGCACATCCT GCTGATGTCG GACGAGCACG CCGAGGACCA GCTCGCCCGC
GCCTACGAGG CTGGCGCCGA CGGCTACGCG CACAGCGCGC TCAGCGCCAA GAGCCTGCGC
ACGCGGCTGT GCGCGGCGCA GCGCCTGCTG CAACTGCAGA ACGCGTGGGA GCGCGACCGC
GCGCAGTTGC GCCAGATCGC GGCCGAACTG GCCGTCGCCA ACCGCCGCCT CGCCAACGCC
GCGCTGACCG ACGCGCTGAC CGGTCTGCCC AACCGCCGCT CGGCGATGGA CCAGCTCGAG
CAGGCCTGGA GCGCCGCGGC GCGCGCCGAC ACACCGCTCG CGGTCATGGT CGTCGACATC
GATCACTTCA AGCACATCAA CGACACCCAC GGACACGCCC TCGGCGACAA GGTGCTGCGC
GAGGCCGCGA ATGCGCTGCG CGCGTCGTCG CGCCGGGAGG ACAGCGTGTG CCGGATCGGC
GGCGAGGAGT TCCTGGTCAT CTGTCCGAAC ACCGATCTCG CTGCGGCCAT GCAATCGGCC
GAACGCCTGC GGGCCACGCT GAGCGCCCGT CGCATCGCCG TGGGCGAGGC CGAGTGCACG
ATCACCGCGA GCATCGGCGT GGCCGTGCGC GAATACGACA CGGCCGACAT CGACGGCCTC
GTCAGCGCGG CGGATCAGGC GCTCTATGCC GCCAAGGAAG CGGGCCGCAA CCAGGTCTGC
ACCCAGCGCC GCCGGCCGGT CGCGGTCGAA GCGCCGTAG
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| Protein sequence | MTQLDQLKLS GQLPSPRGVA LAVLELSRRD NATLGEIARV VQTDPALSGR LIKLANSASH
IARPVVSVQE AVVRQGMSTV RQLALGFSLL DQFRNGACTA FDYQEYWSHS LLMALSLQAL
GARVHVAAAD ELFICGLLAQ VGRLALATAY PAEYDAVLHA HRTDPSKSLI TLERSRLEID
HIELGIVMMT DWGMPRVFTI PLAHYQDPEY TSFPHDSRAN SLMLMLRLSH RLADLALGSA
DGRMQLAREW MTLATELDLP PENAGSFIDE VIAQWHDWGA LLKIPTSVLP PFAEISHGSA
EASDDEAPLR IVVADGNAFT RRKIMALLVE DSGHVVYPAD NGNSALALAM EVLPHVIIAH
INLPLLDGLE LCQALRATDE GRRMHILLMS DEHAEDQLAR AYEAGADGYA HSALSAKSLR
TRLCAAQRLL QLQNAWERDR AQLRQIAAEL AVANRRLANA ALTDALTGLP NRRSAMDQLE
QAWSAAARAD TPLAVMVVDI DHFKHINDTH GHALGDKVLR EAANALRASS RREDSVCRIG
GEEFLVICPN TDLAAAMQSA ERLRATLSAR RIAVGEAECT ITASIGVAVR EYDTADIDGL
VSAADQALYA AKEAGRNQVC TQRRRPVAVE AP
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