Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2021 |
Symbol | |
ID | 3672192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2110294 |
End bp | 2110983 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637710723 |
Product | DNA-(apurinic or apyrimidinic site) lyase / endonuclease III |
Protein accession | YP_315779 |
Protein GI | 74318039 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0177] Predicted EndoIII-related endonuclease |
TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCTG ACAAACGCCG CGAGATTTTC CGCCGCCTGC GCGAAGCGAA TCCCCACCCG ACGACCGAGC TCGAATACGC GACGCCTTTC GAGCTGCTGG TCGCGGTCGT GCTCTCGGCG CAGTCGACGG ACAAGGGCGT CAATCGCGCG ACGCGCGTGC TCTTCCCGAT CGCCAACACG CCTGCGGCGA TCCACGCGCT CGGCGAGGCG GGGCTCGCCG ACTACATCAA GACGATCGGA CTCTACAAAA GCAAGGCGCG GCACCTGATC GCGGCATCGC GCATGCTGCT CGACCTGCAC GGCGGCGAAG TCCCCGCCGA CCGCGCCGCG CTCGAGGCGC TGCCCGGGGT CGGGCGCAAG ACCGCCAACG TGATCCTCAA CACCGCGTTC GGCCAGGCGA CGATGGCGGT CGACACCCAC ATCTTCCGCG TTGCGAACCG CACCGGCCTC GCCCCCGGGA AGACCGTGCT CGAAGTCGAA AAAAAGCTGG TCAAGACGAC GCCCGCCGAG TTTCTGGTCG ACGCGCACCA CTGGCTGATC CTGCACGGCC GCTACGTCTG CCAGGCGCGC AGGCCGAAGT GTGCGGAATG CATCATCGTC GACCTCTGCG AGTTCAAGGC CAAGACCCTG CCCGCTGCGC CGCGTGCCTC CGCGCGCAAG AGGCCCGCGA CCGAGGCGGC CGATGTTTAA
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Protein sequence | MNADKRREIF RRLREANPHP TTELEYATPF ELLVAVVLSA QSTDKGVNRA TRVLFPIANT PAAIHALGEA GLADYIKTIG LYKSKARHLI AASRMLLDLH GGEVPADRAA LEALPGVGRK TANVILNTAF GQATMAVDTH IFRVANRTGL APGKTVLEVE KKLVKTTPAE FLVDAHHWLI LHGRYVCQAR RPKCAECIIV DLCEFKAKTL PAAPRASARK RPATEAADV
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