Gene Tbd_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2016 
Symbol 
ID3672187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2105678 
End bp2106244 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content64% 
IMG OID637710718 
Productelectron transport complex protein RnfB 
Protein accessionYP_315774 
Protein GI74318034 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACCG CAATCTGGGT CATGGTCGGC CTGGCCATCG CGATCGGGCT GATACTCGGC 
TGGTCGGCGA TCCGCTTCAA GGTCGAGGGC AATCCGCTCG CCGAGAAGAT CGACGCGATT
CTGCCGCAGA CGCAGTGCGG GCAGTGCGGC TTTCCCGGCT GCCGGCCCTA CGCCGAGGCG
ATCGCGAAAG GCGAGGCGGA CATCAACCAG TGTCCGCCCG GCGGCGAGGA AGGGGTCAAA
AAACTTGCCG AACTGCTCGG CGTCGAGCCC AAGCCGCTCG ACGAGGCCCA CGGCACACCG
AAGCCGAAAT CGGTCGCCTT CATCGACGAA CAGACCTGCA TCGGCTGCAC GCTGTGCATC
CAGGCCTGCC CGGTCGATGC GATCTCCGGC GCAGCCAAGC AGATGCATAC CATCATCGCG
GACGAATGCA CGGGCTGCGA ACTGTGTCTC GCCCCCTGTC CCGTCGACTG CATCTCGATG
GTGCCGATCG CCGAGGACCT GCCGCACTGG AAATGGAAGC ACCCCGTGGT GATGATGAAA
CAGGTCGGCG AGAGCACACG CGTATGA
 
Protein sequence
MFTAIWVMVG LAIAIGLILG WSAIRFKVEG NPLAEKIDAI LPQTQCGQCG FPGCRPYAEA 
IAKGEADINQ CPPGGEEGVK KLAELLGVEP KPLDEAHGTP KPKSVAFIDE QTCIGCTLCI
QACPVDAISG AAKQMHTIIA DECTGCELCL APCPVDCISM VPIAEDLPHW KWKHPVVMMK
QVGESTRV