| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2014 |
|---|
| Symbol | |
|---|
| ID | 3672185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2104399 |
|---|
| End bp | 2104869 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637710716 |
|---|
| Product | BadM/Rrf2 family transcriptional regulator |
|---|
| Protein accession | YP_315772 |
|---|
| Protein GI | 74318032 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACTCA CGACCTATAC CGACTACGCC CTTCGTACGC TGATGTATCT CGCCACCCAT
CGCGATCGCC TGGTCACGAT TTCCGAGATC GCCGAGGTCC ACGGGATTTC CAAGAACCAT
TTGATGAAAG TGGTGTACCA GCTTGGCCTG TCGGGACTCG TCGATACACT GCGCGGCCGC
AACGGCGGCT TGCGTCTCAA GCGCGAGCCC ACGGAGATCA CGGTCGGCGA GGTCGTGCGC
AGCACCGAGA CCGACTTCGA CATGGCCGAG TGTTTCGACC CCTCGGGCGA CCGGTGTCTG
TATTCGCCGG CCTGCGTGCT CAAGGACGTG CTGAGTTCGG CGACGCTTGC CTACCTCGGC
GTCCTCGACA AGGTGACGCT CGGGGATCTC GTCGGAGGGG GGCGCGGCAG GAAAAAGACC
GCGCCGATCC AGGTCTATCC GGCTGCCAAG AAGCCTAAAG TCGCGGCCTG A
|
|---|
| Protein sequence | MRLTTYTDYA LRTLMYLATH RDRLVTISEI AEVHGISKNH LMKVVYQLGL SGLVDTLRGR
NGGLRLKREP TEITVGEVVR STETDFDMAE CFDPSGDRCL YSPACVLKDV LSSATLAYLG
VLDKVTLGDL VGGGRGRKKT APIQVYPAAK KPKVAA
|
|---|
| |