| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1976 |
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| Symbol | |
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| ID | 3671728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2066037 |
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| End bp | 2068961 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710675 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_315734 |
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| Protein GI | 74317994 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit
[COG1328] Oxygen-sensitive ribonucleoside-triphosphate reductase |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTA TACCCACCAA GGAGAGCTCA TCGATGTTGA ACGTCGCCAC CGAATCCGCC
GTACCCGTCG CCATTCCGCC GAGCGACGCC GCCGACGCGC CCGCAATCGA CGCGCGCTAC
GCCGACTACA AGATCATTCG CCGCAACGGC GCGGTCGTCG GCTTCGCGCC GAACAAGATC
GCCGTCGCCG TGACCAAGGC GTTCATCGCG GTGCAGGGCG GGCAGGCAGC GGCGTCGGCG
CGCATCCGCG AGCTCGTCGA GGCGATCACG AGCCAGGTGA CCGCCGCGCT GTTGCGGCGC
AACCCGGCTG GCGGCACCTT CCACATCGAA GACGTCCAGG ACCAGGTCGA ACTCGCGCTC
ATGCGCTCGG GCGAACACGA AGTCGCCCGC GCCTACGTGC TCTACCGCGA AAAACGCGCC
CAGGAGCGCG CCGCACAGAA GGCCGCCGGC GTCCCCGAAG TCCAGCTTCA CGTGATCGAG
GACGGCGTCA GGAAGCCGCT CGACACCGCG CGCCTCGCCG GCCTGCTGGC CGACGCGTGC
TCGGACCTCG GCGAGAGCGT CAAGGCCGAG CCGATCATGC ACACCGTGCT GCGCGACCTC
TACGATGGCG TGCCGATGGC CGAAGTCGAA AAGGCGCTCG TGCTTGCCGC CCGCTCGATG
ATCGAGCAGG ACCCGGCGTA TTCGCTGGTC ACCGCCCGCC TGCTGCTCAA TTCGATTCGC
CACGAGGTGC TCGGCGAAGC CGTGACGCAG GCGCAGATGA GCGAGCGCTA CGCCGAATAC
TTTCCCGCGT TCATCAAGAA GGGCATCGCC GCCGAGCTGC TCGACGAGAA GCTCGGCCAG
TTCGACCTCG CGCGGCTCGC CCGCGTGCTC GACGCCGGCC GCGACTACCA GTTCGGCTAC
CTCGGCCTGC AGACCCTGTA TGACCGCTAC TTCCTGCACA TCGAGGAAAA CCGCATCGAA
CTGCCGCAGG CCTTCTTCAT GCGCGTCGCA ATGGGCCTCG CGATCAACGA AATCGACCGC
GAGTCGCGTG CGATCGAGTT CTACCAAGTG CTGTCGTCGT TCGACTTCAT GAGTTCGACG
CCGACGCTCT TCAACTCGGG CACCCGCCAC AGCCAGCTGT CTTCCTGCTA CCTGACCACC
GTCACCGACG ACCTCGACGG CATCTACCAG GCGATCAAGG AAAACGCCAT GCTGCAGAAG
TACGCCGGCG GCCTGGGCAA CGACTGGACC CCGGTGCGCG CGATGGGCGC CCGCATCAAG
GGCACCAACG GCAAGTCGCA GGGCGTCGTC CCCTTCCTCA AGGTCGTCAA CGACACCGCC
GTCGCGGTGA ACCAGGGCGG CAAGCGCAAG GGTGCGGTCT GTGCGTATCT GGAGACCTGG
CACCTCGACA TCGAGGAATT CCTCGACCTC AGGAAGAACA CCGGCGACGA CCGCCGCCGC
ACCCACGACA TGAACACCGC GAACTGGATT CCGGACCTCT TCATGCAGCG CGTGATGGAA
GGCGGCGACT GGACGCTCTT CTCGCCCAAC GACGTGCCCG ACCTGCACGA CCTCTACGGC
CGCAAGTTCG CCGAGGCGTA CACCGAATAC GAGCGCAAAG CCGACCGCGG CGAGCTCAAG
CTCTACAAGC GAATTCCCGC CCTGCAGCTG TGGCGCAAGA TGCTGTCGAT GCTGTTCGAG
ACCGGCCACC CCTGGATCAC GTTCAAGGAC CCGTGCAATA TCCGCAGCCC GCAGCAGCAC
GTCGGCGTCG TGCACTCGTC CAACCTGTGC ACCGAGATCA CGCTGAACAC CAACGACCAC
GAAGTCGCCG TGTGCAACCT CGGTTCCGTC AACCTCGTCA ATCATCTGAA AGACGGCAAG
CTCGATCTGG ACAAGCTGAA GAACACGATC CACACCGCGA TGCGCATGCT CGACAACGTC
GTCGACGTGA ACTACTACGC CGTCGGCAAA GCGCGCAACT CCAACCTCAA GCACCGTCCG
GTGGGCCTCG GCATCATGGG CTTCCAGGAC GCGCTGCAGG AACTGCGCGT CGCCTACGCG
TCGAACGACG CCGTCGAATT CGCCGACCGC TCGATGGAAG CCGTCGCCTA CTATGCCTAC
TGGGCGTCGA CCGAACTCGC GCAGGAGCGC GGCCGCTATT CGAGCTACGA AGGCAGCCTG
TGGAGCAAAG GCATCCTGCC GCACGATTCG AATCGTCTTT TGTTGGAGGA GCGCGGCGGC
TACCTCGAGG TCGACAGCTC GGCCACGCTC GACTGGGACA GCCTGCGTCA AAGGATCGCC
CAGTACGGCA TGCGCAACTC GAACTGCCTC GCGATCGCGC CGACCGCGAC CATCGCCAAC
ATCGTCGGCG TCTCCGCGTC GATCGAGCCG ACCTACCAGA ACCTCTACGT GAAGTCGAAC
CTGTCGGGCG AATTCACCGT CGCCAACAAG TACCTCGTTG CCGACCTGAA AAAGCTCGGC
ATGTGGGACG AGGTCATGGT CGCGGACATC AAGTACTTCG ACGGCAGCCT TGCGCGCATC
GACCGCATCC CGGCCGAGCT GCGCGCGCTC TACGCGACCG CGTTCGAGAT GGAGCCGTCC
TGGCTCGTCG AGTGCGCGAG CCGCCGCCAG AAATGGATCG ACCAGGCGCA GAGCCTCAAC
ATCTACATGG CCGGCGCCTC GGGCAAGAAG CTCGACGACA TCTACAAGCT CGCGTGGCTG
CGCGGCCTGA AGACGACCTA CTACCTGCGC ACGCTCGGTG CCACCTCGGC GGAGAAATCC
ACCGGCAAGG GCGGCGAGTT GAATGCGGTG TCGGCGCACG TCGGCGGCGG GATGAGCGCG
ATGGATGCGG CGGCGGCCAA CCTGCCGGTG CCGGAGATCG AGGGCAAGGT CTGCACGATG
CGGCCGGGGG ATCCGGGGTT CGAGGAGTGT GAGGCTTGTC AGTAA
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| Protein sequence | MSVIPTKESS SMLNVATESA VPVAIPPSDA ADAPAIDARY ADYKIIRRNG AVVGFAPNKI
AVAVTKAFIA VQGGQAAASA RIRELVEAIT SQVTAALLRR NPAGGTFHIE DVQDQVELAL
MRSGEHEVAR AYVLYREKRA QERAAQKAAG VPEVQLHVIE DGVRKPLDTA RLAGLLADAC
SDLGESVKAE PIMHTVLRDL YDGVPMAEVE KALVLAARSM IEQDPAYSLV TARLLLNSIR
HEVLGEAVTQ AQMSERYAEY FPAFIKKGIA AELLDEKLGQ FDLARLARVL DAGRDYQFGY
LGLQTLYDRY FLHIEENRIE LPQAFFMRVA MGLAINEIDR ESRAIEFYQV LSSFDFMSST
PTLFNSGTRH SQLSSCYLTT VTDDLDGIYQ AIKENAMLQK YAGGLGNDWT PVRAMGARIK
GTNGKSQGVV PFLKVVNDTA VAVNQGGKRK GAVCAYLETW HLDIEEFLDL RKNTGDDRRR
THDMNTANWI PDLFMQRVME GGDWTLFSPN DVPDLHDLYG RKFAEAYTEY ERKADRGELK
LYKRIPALQL WRKMLSMLFE TGHPWITFKD PCNIRSPQQH VGVVHSSNLC TEITLNTNDH
EVAVCNLGSV NLVNHLKDGK LDLDKLKNTI HTAMRMLDNV VDVNYYAVGK ARNSNLKHRP
VGLGIMGFQD ALQELRVAYA SNDAVEFADR SMEAVAYYAY WASTELAQER GRYSSYEGSL
WSKGILPHDS NRLLLEERGG YLEVDSSATL DWDSLRQRIA QYGMRNSNCL AIAPTATIAN
IVGVSASIEP TYQNLYVKSN LSGEFTVANK YLVADLKKLG MWDEVMVADI KYFDGSLARI
DRIPAELRAL YATAFEMEPS WLVECASRRQ KWIDQAQSLN IYMAGASGKK LDDIYKLAWL
RGLKTTYYLR TLGATSAEKS TGKGGELNAV SAHVGGGMSA MDAAAANLPV PEIEGKVCTM
RPGDPGFEEC EACQ
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