| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1975 |
|---|
| Symbol | |
|---|
| ID | 3671727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2064524 |
|---|
| End bp | 2065654 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637710674 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_315733 |
|---|
| Protein GI | 74317993 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0400777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAACT TTGAAGACGA CTTCACGCCC GCCCCGCAAC TCGTGCCGCG CGTGCCCGAG
CCCGCGTATG TGCCGGCCGC CGCCGCTGCG CCTGCCGCCC AGCCGGCCGC GACGACTCGC
GTGCGCGCCT CCGATAAGCG TGTCATCAAC GGCGCCACCG ACGTGAACCA GCTCGTTCCC
TTCAAGTACA AGTGGGCGTG GGAGAAATAC CTCGCCGGCT GCGCCAACCA CTGGATGCCG
CAGGAAGTGA ACATGAGCCG CGACATCGCG CAGTGGAAGG ACCCGACCGC GCTGACCGAG
GACGAGCGCC GCATCGTCAA GCGCAACCTC GGCTTCTTCG TGACGGCCGA TTCGCTCGCC
GCCAACAACA TCGTGCTCGG CACCTACCGC CACATCACAG CGCCCGAGTG CCGCCAGTAC
CTGCTGCGCC AGGCCTTCGA AGAGGCGATC CACACCCACG CCTACCAGTA CATCGTCGAA
AGCCTGGGCC TCGACGAGGC GGAAATCTTC AACGCCTACC ACGAGATCGA GAGCATCCGC
GACAAGGACG ACTTCCTCAT CCCCTTCATC GATACGCTCA CCAACCCCGA ATTCAAGACC
GGCACGCCGG AGAACGACCA GAAACTGCTG AAGTCGCTGA TCGTCTTCGC CTGCATCATG
GAAGGCATCT TCTTCTATGT CGGCTTCGTG CAGATCCTCG CGCTCGGCCG CCAGAACAAG
ATGACCGGCG CCGCCGAGCA GTACCAGTAC ATCCTGCGCG ACGAGTCCAT GCACTGCAAC
TTCGGCATCG ACCTCATCAA CACCATCAAG CAGGAAAACC CGCACCTCTG GACCAGCGAG
TTCAAGGCCG AGATCCGCAC CCTGATCCAG AAGGGCGTCG AGCTCGAATT CCGCTACGCC
GAAGACACCA TGCCGCGCGG CGTGCTGGGC CTCAACTCCG CTCAGTTCAA GGAATACCTG
CGCTTCATCT CCAACCGCCG CTGCCAGCAG ATCGGGCTGG ACGAGATGTT CCCCGGCGTC
AGCAACCCCT TCCCCTGGAT GGCCGAGATG ATCGACCTGA AGAAGGAGAA GAACTTCTTC
GAGACGCGCG TCACCGAGTA TCAGACGGGC GGGGCGTTGA GCTGGGATTG A
|
|---|
| Protein sequence | MLNFEDDFTP APQLVPRVPE PAYVPAAAAA PAAQPAATTR VRASDKRVIN GATDVNQLVP
FKYKWAWEKY LAGCANHWMP QEVNMSRDIA QWKDPTALTE DERRIVKRNL GFFVTADSLA
ANNIVLGTYR HITAPECRQY LLRQAFEEAI HTHAYQYIVE SLGLDEAEIF NAYHEIESIR
DKDDFLIPFI DTLTNPEFKT GTPENDQKLL KSLIVFACIM EGIFFYVGFV QILALGRQNK
MTGAAEQYQY ILRDESMHCN FGIDLINTIK QENPHLWTSE FKAEIRTLIQ KGVELEFRYA
EDTMPRGVLG LNSAQFKEYL RFISNRRCQQ IGLDEMFPGV SNPFPWMAEM IDLKKEKNFF
ETRVTEYQTG GALSWD
|
|---|
| |