| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1970 |
|---|
| Symbol | |
|---|
| ID | 3671722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2061326 |
|---|
| End bp | 2061931 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637710669 |
|---|
| Product | putative denitrification protein NorE |
|---|
| Protein accession | YP_315728 |
|---|
| Protein GI | 74317988 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTC TCGCTATTGA AGCGCCATCC CGGCCGCAAG TGCGCACGGT GACCGGCCGA
ATACCGGGCA ACAGGGGCAT GTGGGCGGGG ATCACGTGCG AATTCGTCGA GTTCATCGTT
CTCTTCGCTG TCTATTTCGT CGCGCGTGCC CACTTTCCGG ACGCGTTCGA GCAGGGCGCG
CAGCGCCTTT CGCTCGCTTC GGGCACCGCG ATTACGTTGA TCATGGTCAC CAGCAGCTTT
TTCATCGCCT GCTCGGTGGC AACGATACGC GCCGGTCGAC GCCGGCAGTC GTTCTGGTGG
CTGGTCGCCG GACTGGTCGT GGCGCTCGGT TATCCCGTCG TGAAGTTTTT CGAAGTCCAG
GCGAACCTCG CGCAAGGGAT CAATGGCGAG GCGGGGATTT TCTTCACCGT CTATTACTAC
CTGACGATCA ACCATCTGGT GCACTCGTTC TGGGGGATTC TCGGCATTTT CTGGGTTCTG
GCACGCCACC TCGGCGGGGC GTATTCGTCC GACGATTACA GCGGCCTGGA GGCGCTGGCG
AGCTATTGGC ACGCGACCGA CATCATCTGG CTGGTCATCT TCCAACTCTG CTACGTATTG
GCCTGA
|
|---|
| Protein sequence | MTTLAIEAPS RPQVRTVTGR IPGNRGMWAG ITCEFVEFIV LFAVYFVARA HFPDAFEQGA
QRLSLASGTA ITLIMVTSSF FIACSVATIR AGRRRQSFWW LVAGLVVALG YPVVKFFEVQ
ANLAQGINGE AGIFFTVYYY LTINHLVHSF WGILGIFWVL ARHLGGAYSS DDYSGLEALA
SYWHATDIIW LVIFQLCYVL A
|
|---|
| |