| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1938 |
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| Symbol | |
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| ID | 3674048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2031840 |
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| End bp | 2033108 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637710637 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_315696 |
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| Protein GI | 74317956 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.509602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.818289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGTAAGG AAACCTTTCT CGCGAGGCAA CCCATCGTCG ACGCCGCACA CGGCCTCTTC
GCTTACGAGC TGCTGTTCAG GCAGTCGCTG AATTCCGTCT CCGCCCAGAT CGGCAGCCAG
CTCCAGGCCG GCGTCGAGGT CATCAGCAAC ACCCTCTGTC TCGGGCCGGA GTGGCTGCTG
CAGGGCAAGC TCGCCTTCAT CAATCTCGAC GAAGCGACGC TGATGAGCGA CTTCGTCTGC
CTGCTTCCGC CGCATCACGT CGTCTACGAA ATCCTCGAGA CCGTGCCGAT GTCGGCGGTG
CTGGTCGCCC GCATCCGCGA GCTCAAGCAG CTCGGCTACC GCTTCGCGCT CGACGATTTC
GTCTGCCTCG AGGAATATCG CCCGCTGTTG CCGATGGTGG ACTTCGTCAA GCTCGACGTG
CTCGAACAGC ATGCGGAAAA GACCGTCGAG ATCATCGCGC ACATCCGGCT CAACTTCCGC
GGCCAGTTCA TCGCCGAGAA GGTCGAAAGC CGCGAGATGT TCGAGCTCTG CCGCGACGCC
GGCATCGAGT ATTTCCAGGG TTATTATTTC GCCCGCCCGG AGAACTTCTC GAGCAAGACC
ATCCAGCCCG GACAACTTGC GGTGCTCGAC CTGATGAACC AGGTTCGCGC GTGCGACGAC
CTCGGCGAGA TCGAGGAGCC TTTGCGGCGC AACGCCGCGC TGACGCTGCG CCTGCTGCGC
TACGCCAATT CGGCGGCGTC GGGCGTGCGC CAGCCGGTTC ACACGGTGCG CCAGGCGCTG
ACGCTCGTCG GACTGAGGAC GCTCTACCGC TGGCTCGCGC TGCTCCTCGT CGTCGCCAAC
CCGAGCCCGA CTAACCTCCT GCTCGCCCGC ACCGCCGTGA CCCGCGGACG CGTCTGCGAG
CTGCTCGGCC AGCCGCGCCT CGACCGCGAC GCACAGGACG AACTCTTCAT CACCGGCTTG
TTTTCGCTCG CGGGCCCACT CATGGGCACG CCGCTGCCCG ACCTGCTCGC GCGTCTGCCG
ATGCCCGACG CGATCGTGCA GGCGCTGCTC GATCGCAGCG GTCCCTACGC ACCTTTCCTC
GCGCTCGCCG AAGCGTCGGA GCGCAACGAT TTCGAGGCGA TCGCGCGGTA CGCGGGCGAG
ATCGCGTGCC CACCCGAGGA GATCACCGTC GTCGAATTGC AGTCGCTCGC GTGGACGGAG
GCGCTGAGCA CGGAAATGGC AGAAGACGCC GCCGCACCGG CTCGCACGCG CAGCGACACG
CGCGCCTGA
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| Protein sequence | MGKETFLARQ PIVDAAHGLF AYELLFRQSL NSVSAQIGSQ LQAGVEVISN TLCLGPEWLL
QGKLAFINLD EATLMSDFVC LLPPHHVVYE ILETVPMSAV LVARIRELKQ LGYRFALDDF
VCLEEYRPLL PMVDFVKLDV LEQHAEKTVE IIAHIRLNFR GQFIAEKVES REMFELCRDA
GIEYFQGYYF ARPENFSSKT IQPGQLAVLD LMNQVRACDD LGEIEEPLRR NAALTLRLLR
YANSAASGVR QPVHTVRQAL TLVGLRTLYR WLALLLVVAN PSPTNLLLAR TAVTRGRVCE
LLGQPRLDRD AQDELFITGL FSLAGPLMGT PLPDLLARLP MPDAIVQALL DRSGPYAPFL
ALAEASERND FEAIARYAGE IACPPEEITV VELQSLAWTE ALSTEMAEDA AAPARTRSDT
RA
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