Gene Tbd_1925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1925 
Symbol 
ID3674035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2021886 
End bp2022422 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID637710624 
Productflavin reductase-like protein 
Protein accessionYP_315683 
Protein GI74317943 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.802506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAAC GGTCTTATCC CTTATCCAAG GTTTACCGCC TGCTGGAGCC TGGCCCGGTC 
GTGCTGCTCG CTACCGCGTG GCGCGGACGG GCCAACGTCA TGACCTTGTC CTGGCACACG
ATGCTCGAGT TCGAACCGCC GCTGCTCGGC TGCGTGATCA GCGGGCGCAA CGCCTCCTTC
GACGCCGTGC GGGCGACGCG GGTATGCACG CTCAACATTC CGACTGTCGA ACTGGCGAAC
GCGGTCGTCG GCATCGGCAA CTGCTCGGGA CGCTCCGTCG ACACGTTTGC CCGTTTCGGT
CTCACCCCGG CGCCCGCGTC CACGGTGTCG GCGCCGCTGA TCGTCGAGTG CCACGCGAAT
CTCGAATGCC GCGTCGCCGA CACGCGCGAG GTGAATCGCT ACAATTTCTT CGTGCTCGAA
GTGCTGAAGG CACGTGTGGA TACGGGCGTC AAGGAACCGA AGACGCTGCA CCATCGCGGC
AAGGGCGAGT TTTTCGTCGC CGGCGAGACG CTGCGCCTGC GCTCGGCGAT GAAATGA
 
Protein sequence
MAKRSYPLSK VYRLLEPGPV VLLATAWRGR ANVMTLSWHT MLEFEPPLLG CVISGRNASF 
DAVRATRVCT LNIPTVELAN AVVGIGNCSG RSVDTFARFG LTPAPASTVS APLIVECHAN
LECRVADTRE VNRYNFFVLE VLKARVDTGV KEPKTLHHRG KGEFFVAGET LRLRSAMK