Gene Tbd_1915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1915 
Symbol 
ID3674025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand- 
Start bp2010953 
End bp2011570 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID637710614 
Productphosphoribosylanthranilate isomerase 
Protein accessionYP_315673 
Protein GI74317933 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0135] Phosphoribosylanthranilate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.370127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.693187 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTTC GCGTAAAAAT CTGCGGAATT ACCCGCGTCG ACGACCTGCA CGCTGCGTGC 
GACGCCGGCG CAGATGCGCT TGGCTTCGTT TTCTACGAGA AGAGCCCGCG TCATCTGACG 
CTCGACGCCG CCGCCGCGCT GCTGCGGGAA GTCCCGCCAT TCGTTCAGAC TGTGGGCCTT 
TTCGTCGACG CCAACCCGGC CTTTGTCGAC TCGGTGTTGC GCGCTGTGCC GCTCGATCTG 
CTGCAGTTTC ATGGCGACGA GAAGCCCGCC GACTGCGCGC GCCACGGCCG GCCCTGGATC 
AAGGCCATAC GCGTCAGAGC GGACACGGAT TTGCTAAAAT GCGCGGCTGA CTTCGCGGCC 
GCGAGCGGGC TTCTGCTCGA CGCCTACGTG CCCGGCGTGC CCGGTGGCAC CGGGGCGCGC 
TTCGACTGGC GGCTGATTCC GCCGCGTCTG CCCCAGCGGG TTATTTTGTC CGGAGGGCTC 
ACGCCGGATA ACGTTGCCGA CGCGGTCCGG CGCGTCCGTC CCTGGGCGGT CGACGTGTCC 
TCGGGCGTCG AGGCGGCGAA AGGCATCAAG GACGCGCAGA AGATCGCGCG ATTCATCTCA 
CAGGCGAAAG CATCATGA
 
Protein sequence
MAVRVKICGI TRVDDLHAAC DAGADALGFV FYEKSPRHLT LDAAAALLRE VPPFVQTVGL 
FVDANPAFVD SVLRAVPLDL LQFHGDEKPA DCARHGRPWI KAIRVRADTD LLKCAADFAA 
ASGLLLDAYV PGVPGGTGAR FDWRLIPPRL PQRVILSGGL TPDNVADAVR RVRPWAVDVS 
SGVEAAKGIK DAQKIARFIS QAKAS