| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1914 |
|---|
| Symbol | |
|---|
| ID | 3674024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 2009757 |
|---|
| End bp | 2010956 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637710613 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_315672 |
|---|
| Protein GI | 74317932 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.148244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.536089 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGA CTGACCTTCC CGATTCCCGC GGCCACTTCG GTCCCTACGG CGGCATTTTC
GTTTCCGAAA CGCTGATGGC CGCGCTCGAC GCGCTGCGTG TCGAATACGA CGCGGCGTGC
CGGGACCCCG GCTTCATGGC CGAATTCGAG TACGAACTCA AGCACTACGT CGGGCGGCCG
AGCCCGGTCT ACCACGCCCG GCGGCTTTCG GAGGAATACG GCGGCGCGCA GATCTACCTC
AAGCGCGAGG ATCTCAACCA CACCGGCGCG CACAAGATCA ACAACACGAT CGGCCAGGCG
CTGCTCGCGC GCCGCATGGG CAAGAAGCGC GTCATCGCCG AGACCGGCGC GGGCCAGCAC
GGCGTCGCGT CGGCGACCGT CGCCGCGCGC TACGGCATGG AATGCGTTGT CTACATGGGC
GCCGAAGACG TCGCGCGACA GGCCCCCAAC GTCTTTCGTA TGAAGCTCCT CGGCGCGACC
GTCGTGCCCG TGTCGTCGGG TTCGAAGACG CTGAAGGACG CGCTGAACGA AGCGATGCGC
GACTGGGTGA CGAACGTCGA GTCGACCTTC TACATCCTCG GCACCGCGGC CGGCCCGCAT
CCCTACCCGA TGCTCGTGCG CGACTTCCAG TGCGTGATCG GGCGCGAATG CATCGCGCAG
ATGCCCGAGC TCGTCGGACG CCAGCCCGAC GCGGTCGTCG CCTGCGTCGG CGGCGGCTCG
AACGCGATCG GAATTTTCCA TCCCTACATT CCCCATGAGA ACGTGCGCCT GATCGGTGTC
GAAGCCGGCG GTTCGGGGGT CGCGAGCGGC AAGCACGCTG CGCCGCTGAC CGCCGGCACG
CCCGGGGTGT TGCACGGCTT TCGCAGCTAC CTGATGCAGG ACGAGAACGG CCAGATCATC
GAGACCCATT CGGTCTCGGC CGGCCTCGAC TATCCGGGCG TCGGCCCCGA GCACAGCTAT
CTCAAGGACG CCGGTCGCGC CGAATACGTG CCGATCAACG ACGACGAAGC GCTCGCCGCC
TTCCACGATC TGTGCCGCTT CGAGGGCATC ATCCCCGCGC TCGAGTCGAG CCACGCGGTG
GCGCAGGCGA AGAAACTCGC GCCGACGATG AAGAAGGACC AGGTCATTCT GGTGAACCTC
TCGGGGCGCG GCGACAAGGA CATCAACACC GTGGCGAAGG CGGCGGGCAT CACGCTCTGA
|
|---|
| Protein sequence | MKLTDLPDSR GHFGPYGGIF VSETLMAALD ALRVEYDAAC RDPGFMAEFE YELKHYVGRP
SPVYHARRLS EEYGGAQIYL KREDLNHTGA HKINNTIGQA LLARRMGKKR VIAETGAGQH
GVASATVAAR YGMECVVYMG AEDVARQAPN VFRMKLLGAT VVPVSSGSKT LKDALNEAMR
DWVTNVESTF YILGTAAGPH PYPMLVRDFQ CVIGRECIAQ MPELVGRQPD AVVACVGGGS
NAIGIFHPYI PHENVRLIGV EAGGSGVASG KHAAPLTAGT PGVLHGFRSY LMQDENGQII
ETHSVSAGLD YPGVGPEHSY LKDAGRAEYV PINDDEALAA FHDLCRFEGI IPALESSHAV
AQAKKLAPTM KKDQVILVNL SGRGDKDINT VAKAAGITL
|
|---|
| |