Gene Tbd_1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1899 
Symbol 
ID3674009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1996116 
End bp1996904 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID637710598 
Producthypothetical protein 
Protein accessionYP_315657 
Protein GI74317917 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAGGC AGGCCATCGA AAACCTCGGC GCCCGCACGA TAGACGCGGT CTGGCGCATC 
GGCTTCGCGA CCCGTTTCTT CGCCGCGACG CTGCTGCATT CGGGCACCGC GTTCCGCCGT
TTCGGCCTGA CCGTGCGTGA GCTCTATTTC ACCGGCGTGC TGTCGCTCAT CATCATCCTG
GTGTCGGGCC TCTTCGTCGG CATGGTGCTC GGGCTGCAAG GCTACGAGAC CTTGCAGACC
TACGGCTCGG AGGAAGCGCT CGGCATCCTG GTCGCGCTGT CGCTGGTGCG CGAACTCGGC
CCGGTCGTCG CGGCCTTGCT GTTCGCCAGC CGCGCCGGCA GCGCGATCAC GGCCGAGATC
GGCCTCATGA AGGCGACCGA ACAGCTTTCG GCGATGGAAA TGATGGCCGT CGACCCGATC
GCCCGCGTCG TCGCGCCGCG CTTCTGGGCA GGCGTGATCT CGATGCCGCT CCTGGCGGCA
CTGTTCTCGG CCATGGGGGT GTTCGGCGGC TACCTCGTCG GCGTGCAGCT GATCGGGGTC
GACGAGGGCG CGTTCTGGTC GCAGATGCAA AGTGCGGTGG ATTTCGAGCA GGACATCCTG
AACGGCGTCA TCAAGAGCGT CGTCTTCGGC GTCGCGATCA CCGCGATCGC GCTGTTCGAG
GGCTACGACG CGCCGCCGAC CGCCGAGGGG GTGTCGCGGG CGACGACCCG TACCGTGGTG
ACCTCGAGCC TCGCGGTGCT CGCGCTCGAT TTCGTTTTGA CTGCATTCAT GTTCCGGGGA
AGCAACTGA
 
Protein sequence
MLRQAIENLG ARTIDAVWRI GFATRFFAAT LLHSGTAFRR FGLTVRELYF TGVLSLIIIL 
VSGLFVGMVL GLQGYETLQT YGSEEALGIL VALSLVRELG PVVAALLFAS RAGSAITAEI
GLMKATEQLS AMEMMAVDPI ARVVAPRFWA GVISMPLLAA LFSAMGVFGG YLVGVQLIGV
DEGAFWSQMQ SAVDFEQDIL NGVIKSVVFG VAITAIALFE GYDAPPTAEG VSRATTRTVV
TSSLAVLALD FVLTAFMFRG SN