Gene Tbd_1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1891 
Symbol 
ID3674001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1990106 
End bp1991359 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content69% 
IMG OID637710590 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_315649 
Protein GI74317909 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAC TGCTGATCCA GGGCGGCAAT CCGCTCGCGG GCGAGGTGCG GATTTCCGGG 
GCGAAGAACG CCGCGCTGCC GATCCTGACC GCGAGCCTGC TTACGGCCGA GCCGCTCAGG
CTCGGCAACG TGCCGCACCT CAAGGACATC AGCACCATGC TCGCGCTGCT CGGGCACATG
GGCGTGCGCG TCACGCTCGA CGACAAGAAT CACGTCACGC TTTCGGGCGA TTCGATCCCG
CACAAGGAAG CGCCCTACGA AATGGTCAAG ACCATGCGCG CGGCGATCCT CGTGCTCGGG
CCGACGCTCG CGCGCTTCGG CGAGGCGCGC GTCTCGCTGC CCGGCGGTTG CGCGATCGGC
TCGCGCCCGG TCGACCTGCA CATCAAAGGC CTGCAGGCCA TGGGCGCCGA CATCTCGATC
GAACACGGCT ACATCCACGC GCGCTGCAAG CGCCTGCAAG GGGCGCGGAT CGTCATGGAC
ATGGTGACCG TGACGGGGAC CGAGAATCTG ATGATGGCGG CGGCACTCGC CGAGGGGACG
ACCGTGCTCG AGAACGCGGC ACGCGAACCC GAGGTCGTCG ATCTCGCACG CTGCCTCATC
GCGATGGGCG CGAAGATCGA GGGCGCCGGC ACTGACGTCA TCACCGTGCA CGGCGTCGAG
GCGCTCCACG GCGCCGAGTA CTCGGTCATG GCCGATCGCA TCGAGACCGG CACCTTTCTC
GTCGCGGCCG CGATGACCGG CGGCCGCGTG CGCGCGACGC ACACCTCGCC CGACACGCTC
GAAGCCGTGA TTTCGAAGCT GCGCGAGGCC GGTGCCAAGG TGAGCGTCGG CGACGACTGG
ATCGAAGTCG AATCGACCGG CAAGCTCGAC TCGGTCGACG TGCGCACTGC GCCGCATCCG
GCGTTTCCGA CCGACATGCA GGCCCAGTTC ATGGCGATGA ACACGATCGC CGTGGGCGCC
GCGAGCGTGA CGGAAACAAT TTTCGAGAAC CGCTTCATGC ACGTGCAGGA GCTGCGCCGC
CTCGGCGCCA ACATCGAGGT CTCGGGCCAT ACCGCGCTCG TCCGGGGCGT GGCGCGTCTC
GACGGCGCGA CCGTGATGGC GACCGACCTG CGCGCCTCGG CCTGCCTGGT GCTGGCGGGC
CTCGTCGCCG CGGGCGAGAC CACGATCGAG CGCATCTACC ACCTCGACCG CGGCTACGAG
CGCATCGAGG AAAAGCTGAC CCAGCTGGGC GGGCGCATCA AGCGCGTGCA CTGA
 
Protein sequence
MDALLIQGGN PLAGEVRISG AKNAALPILT ASLLTAEPLR LGNVPHLKDI STMLALLGHM 
GVRVTLDDKN HVTLSGDSIP HKEAPYEMVK TMRAAILVLG PTLARFGEAR VSLPGGCAIG
SRPVDLHIKG LQAMGADISI EHGYIHARCK RLQGARIVMD MVTVTGTENL MMAAALAEGT
TVLENAAREP EVVDLARCLI AMGAKIEGAG TDVITVHGVE ALHGAEYSVM ADRIETGTFL
VAAAMTGGRV RATHTSPDTL EAVISKLREA GAKVSVGDDW IEVESTGKLD SVDVRTAPHP
AFPTDMQAQF MAMNTIAVGA ASVTETIFEN RFMHVQELRR LGANIEVSGH TALVRGVARL
DGATVMATDL RASACLVLAG LVAAGETTIE RIYHLDRGYE RIEEKLTQLG GRIKRVH