Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1880 |
Symbol | |
ID | 3673990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1977449 |
End bp | 1978525 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637710579 |
Product | CDP-glucose 4,6-dehydratase |
Protein accession | YP_315638 |
Protein GI | 74317898 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.457819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAGATA TGGTGACGAG CCCGGACTTC TGGCAGGGCA AGCGGGTTTT TGTAACGGGT CACACGGGCT TCAAGGGGAG CTGGCTCTGT CTTTGGCTGC AAAGCATGGG GGCGGAGGTC TTGGGATTTG CGCTTCCCCC CCCCACCGAT CCCAACCTGT ATGAGGCCGC CGGGGTGACC CGCGGCATGC ATTCGCATCT GGGCGACATC CGGCAGGGCG AGGAGCTGGC ACGCGTATTG GCGGCATCGC GGCCCGATGT CGTATTCCAT TTAGCGGCCC AGCCACTGGT CCGTCACAGC TATACCCATC CCGTTGAAAC GTACTCCACG AATGTGATGG GAACGGTCAA TCTGCTCGAG GCCGTGAGGC GAGCCCCGTC AGTGCGTTCC GTGGTCATCG TCACGAGCGA CAAGAGTTAC GAAAATCGCG AATGGCCCTG GGGGTATCGC GAGATAGATC CGATGGGGGG ATACGATCCG TACAGCAACA GCAAGGGCTG CGCGGAGCTT GTGGTTTCAG CTTACCGCAG CTCCTATTTC AATCCGGCAA ACTACCAGGA GCATCGTGTC GCCCTGGCAT CGGCGCGGGC GGGTAATGTG ATCGGTGGCG GCGACTGGGC TGCCGATCGG CTGGTGCCCG ACATTGTTCG TGCGGTTAGC GTGGGGCGTC CGGTGTGGAT ACGGAATCCT CATGCCATTC GTCCGTGGCA GCACGTTCTG GAGCCGCTCT CCGGATACCT GCTACTCGCG CAGCGCTTAT ACGAGCAGGG GCCCGCGTTT GCACAGGGCT GGAATTTTGG TCCTGCCGAT GACGATGCGC AGCCGGTCTC CTGGATCGTC GACCGAGTAA CCGCTCTCTG GGGGGAGGGG GCCCGCTGGG AGTTGGAAGG CGGAGAGCAT GCGCATGAGG CGAATTATCT TCGCCTCGAC TGCTCGAAGG CGCGAGCCGA GTTGCAGTGG CACCCGAAAT GGACGCTCGG CCAAGCCCTG GACAAGACAG TCGAGTGGTA CCGGGCAGCC GGATCGGGCG CTGACATGCG CCCGTTCACG CTTGGCCAAA TCGAAGCCTA CCTCTGA
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Protein sequence | MEDMVTSPDF WQGKRVFVTG HTGFKGSWLC LWLQSMGAEV LGFALPPPTD PNLYEAAGVT RGMHSHLGDI RQGEELARVL AASRPDVVFH LAAQPLVRHS YTHPVETYST NVMGTVNLLE AVRRAPSVRS VVIVTSDKSY ENREWPWGYR EIDPMGGYDP YSNSKGCAEL VVSAYRSSYF NPANYQEHRV ALASARAGNV IGGGDWAADR LVPDIVRAVS VGRPVWIRNP HAIRPWQHVL EPLSGYLLLA QRLYEQGPAF AQGWNFGPAD DDAQPVSWIV DRVTALWGEG ARWELEGGEH AHEANYLRLD CSKARAELQW HPKWTLGQAL DKTVEWYRAA GSGADMRPFT LGQIEAYL
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