Gene Tbd_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1875 
Symbol 
ID3673985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1971546 
End bp1972271 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content59% 
IMG OID637710574 
Productglycosyl transferase, group 2 family protein 
Protein accessionYP_315633 
Protein GI74317893 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCCG TGTGCGTCGC CACATACAAT GGCGCCCGCT ACGTCTTGGC GCAGTTGCAG 
AGCGTTCTGC CTCAGTTGGC GGCGGATGAC GAAGTAATCG TAGCTGACGA TGGATCGACC
GACGCCACAC GCGAGGTGGT GAAAGGCATT GGAGATCCAA GGATTCTCTG GCTCGAAAGC
TCGCGAGTTG GCGTCGTCCG TAATTTTGAG CACGCCTTGC GGCATGCACG AGGCGACGTG
ATTTTTCTGT GCGATCAGGA CGACATCTGG CTGCCCGACA AGGTGCAACG AGTCTTACGA
GCATTGCATG AGACGAACCT CGTCGTGACC GATTGTCGGG TAGTCGACGA CGCGCTCAAC
GAACTGCATC CATCCTTTTT TCGCCTCAAC GGGTCGGGCG TCGGGTTGTT TCGGAACCTT
GCTAAAAACG GTTATCTGGG TTGCTGCATG GCGATGCAGC GCTCGGTTCT AGAGGCCGCG
TTGCCCTTTC CCGAGGGCAT CGCGATGCAC GACTGGTGGA TCGGCTTGGT TGCCGAGCGC
ATGGGACGAG TGCATTTCCT TAATGAAACA CTGTCGCTGT ACCGTCGGCA TGGTGGTAAC
GCTAGCCCGG CGGCCACGCG TTCTAACGTG CCGCTCGGCA CGCGGTTGCG CTGGCGCGTG
GACATGGTGC GGCACTTGTT TACGCGCCGT CCCCGGTCAA TTGTGACGGA GCGGTCAGAC
GCATGA
 
Protein sequence
MISVCVATYN GARYVLAQLQ SVLPQLAADD EVIVADDGST DATREVVKGI GDPRILWLES 
SRVGVVRNFE HALRHARGDV IFLCDQDDIW LPDKVQRVLR ALHETNLVVT DCRVVDDALN
ELHPSFFRLN GSGVGLFRNL AKNGYLGCCM AMQRSVLEAA LPFPEGIAMH DWWIGLVAER
MGRVHFLNET LSLYRRHGGN ASPAATRSNV PLGTRLRWRV DMVRHLFTRR PRSIVTERSD
A