| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1865 |
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| Symbol | |
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| ID | 3671530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1960927 |
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| End bp | 1961331 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637710564 |
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| Product | pilus assembly protein |
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| Protein accession | YP_315623 |
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| Protein GI | 74317883 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGG GAAGACAAAA CGGATTCACG TTGATCGAAC TGATGATTAC GGTGGCGATC
GTCGGCATTC TGGCGTCGAT CGCCTATCCG GGGTATCAGA AATACATGCT CTCGGCGCGC
CGTGCCGACG CGCAGGCCGA CCTGCTCAAG ATACAGCTCG GGCTCGAGAA GTGGCGGGCG
AATCACAACA CCTACTCGAG CAACCTCGCT GACGCCGGTT TTTCCGACAA CAATCCCTAT
TACGGCTACA GCATCACGGT CGGCAGCGCC ACCGCCACCA GCGCCAGCGC CTATACCGTC
ACGGCGACCG CCACCGGCGC CCAGGCCAAC GACAGCGGCT GTACGTCGCT CGCGATCAAC
CAGAGCGGCA ACAAAACACC CGCTTCGGGC TGCTGGACGA AATAG
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| Protein sequence | MKSGRQNGFT LIELMITVAI VGILASIAYP GYQKYMLSAR RADAQADLLK IQLGLEKWRA
NHNTYSSNLA DAGFSDNNPY YGYSITVGSA TATSASAYTV TATATGAQAN DSGCTSLAIN
QSGNKTPASG CWTK
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