| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1860 |
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| Symbol | |
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| ID | 3671525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1954347 |
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| End bp | 1955273 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637710559 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_315618 |
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| Protein GI | 74317878 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA CCGTTCTGCT CGCCAATCCG CGCGGCTTCT GCGCCGGCGT CGACCGCGCG
ATCGCGATCG TCGAACGCGC GCTGGAAAAA TTCGGCGCAC CGATCTACGT GCGCCACGAA
GTCGTCCACA ACACCTTCGT CGTCGACGAC CTCAAGCGCA AGGGTGCCGT TTTTGTCGAG
GAACTGTCCG AGGTGCCGGC CGGCGCGACC GTCATTTTCA GTGCACACGG CGTGTCTCAA
GCTGTGCGCA CTGAAGCCGC AGCCCGCGGG CTGACCGTGT TCGACGCGAC CTGCCCGCTT
GTCACCAAGG TCCACGTCGA AGTCAGCAAG ATGCGCGACA AGGGATACGA GATCGTGATG
ATCGGCCACA AAGGACACCC CGAGGTCGAA GGCACGCTCG GCCAGTCCGC CGGCGGCATG
TACCTCGTCG AGACGCCCGG CGACGTCGCG ACGCTCGAGG TAACGAATCC CGACTGCCTC
GCCTACGTTA CCCAGACTAC ACTCTCGGTC GACGACGCCG CACGCGTGGT CGATGCCCTG
CGCGCGCGCT TCCCCACGAT CACGGGGCCA AAGAAGGACG ACATCTGTTA TGCGACGCAA
AACCGCCAGG ATGCAGTGAA GCATCTGGCG TCGCAGTGCG ACGTCGTCAT CGTCGTGGGA
TCGCCGACCA GTTCGAATTC GAACCGCCTG CGGGAGGTCG CGGAGAACCT GGGGATAGCG
GCCTACATGG TCGACAATGC CGACGAGATC GACCCGCGGT GGGTATCGGG AAACCAACGC
GTCGGCGTGA CCGCCGGGGC GTCGGCACCC GACGTGCTGG TGCGGGCAGT GATCGATCGC
CTGGAACGAC TGGGGATATG TTCGGTGAGC GAGCTCGATG GGGTGCAGGA GAAGGTCGGA
TTCCCTCTGC CGAGAGAGTT GGCGTAA
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| Protein sequence | MTPTVLLANP RGFCAGVDRA IAIVERALEK FGAPIYVRHE VVHNTFVVDD LKRKGAVFVE
ELSEVPAGAT VIFSAHGVSQ AVRTEAAARG LTVFDATCPL VTKVHVEVSK MRDKGYEIVM
IGHKGHPEVE GTLGQSAGGM YLVETPGDVA TLEVTNPDCL AYVTQTTLSV DDAARVVDAL
RARFPTITGP KKDDICYATQ NRQDAVKHLA SQCDVVIVVG SPTSSNSNRL REVAENLGIA
AYMVDNADEI DPRWVSGNQR VGVTAGASAP DVLVRAVIDR LERLGICSVS ELDGVQEKVG
FPLPRELA
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