Gene Tbd_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1762 
Symbol 
ID3671347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1855460 
End bp1855888 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content64% 
IMG OID637710454 
Producthypothetical protein 
Protein accessionYP_315520 
Protein GI74317780 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.292066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCCA TGCGTCAGAT CATCGACACC ATCACGGTCC CGACCCGCGG CAAGGGACTC 
TACGCCTGCA CCGACGAAAT CCTGGCTCGC GTGCGCGCGA GCTTGATCGA GCGCGGCCTG
CTGACGCTCT ACATCCGACA TACCTCGGCG AGCCTCCTGA TACAGGAAAA TTACGACCCG
ACCGTGCAGA GCGATCTCGA ACGCTTTCTG TCGCGGCTGG TGCCCGAGGG CGACCCGATT
TACGAACACG TCCTCGAAGG TGCGGACGAT ATGCCGGCTC ACGTCCGCGC CGCCTTGACG
CAGACTCACC TTGCCATTCC GGTCGCCGAC GGTGTCCCGC TCCTCGGGAC CTGGCAGGGT
ATCTACGTCT TCGAACACCG GCGCGCGCCG CAGACGCGCA GCGTGGTCTT GCACCTGCTC
GGCGAGTAG
 
Protein sequence
MASMRQIIDT ITVPTRGKGL YACTDEILAR VRASLIERGL LTLYIRHTSA SLLIQENYDP 
TVQSDLERFL SRLVPEGDPI YEHVLEGADD MPAHVRAALT QTHLAIPVAD GVPLLGTWQG
IYVFEHRRAP QTRSVVLHLL GE