Gene Tbd_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1710 
Symbol 
ID3671293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1798103 
End bp1798789 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID637710400 
Productimidazole glycerol phosphate synthase subunit hisH 
Protein accessionYP_315468 
Protein GI74317728 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0118] Glutamine amidotransferase 
TIGRFAM ID[TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCG ATATCGCCGT CGTCGACTAC GGCATGGGCA ACCTGCGCTC GGTGTCCAAG 
GCGATCGAGC ACGTCGCGCC GTCCGCCACG GTGGTCGTCA CCTCCAGTCC GGACGTGATC
GCCGAAGCCG GTCGGGTCGT GTTCCCGGGC CAGGGCGCGG CCCGCGACTG TATGCGCGAG
ATCGACGCGC GCGGGCTGCG CGAGGCGATC GCCACGGCCG CGCGCAGCAA GCCCTTCCTC
GGCATCTGCA TGGGCATGCA GGTGCTCTTC GAGCACAGCG AGGAAGGCGA TACGGCCTGC
CTCGGGATTC TTCCTGGCAA CGTGCAGCGC TTTCCGCACG AGGCTATGCA CGACGATCGC
GGCAACAAGC TCAAGGTCCC GCACATGGGC TGGAACAACG TCCACCAGGG CGCGCCGCAT
CCGCTGTGGT CCGGAATCGA GGACGGCGAA CGCTTTTACT TCGTTCACAG CTATTTCGTG
CAGCCGACGA CGCCCGACTT GATCGCGGGC TTCTCGCATT ACCCCTTTCC GTTCACCTGC
GCCGTCGCGT CCGGAAACAT CTTCGCCGTC CAGTTCCACC CGGAAAAAAG CCAGAACGCC
GGGCTCACGC TGCTCGGAAA CTTCGTGACC TGGAATCCGG GCGAGCACGC CTCGGCCTGC
GATCTCTCCG GCGCAAGCTG CGCCTGA
 
Protein sequence
MSVDIAVVDY GMGNLRSVSK AIEHVAPSAT VVVTSSPDVI AEAGRVVFPG QGAARDCMRE 
IDARGLREAI ATAARSKPFL GICMGMQVLF EHSEEGDTAC LGILPGNVQR FPHEAMHDDR
GNKLKVPHMG WNNVHQGAPH PLWSGIEDGE RFYFVHSYFV QPTTPDLIAG FSHYPFPFTC
AVASGNIFAV QFHPEKSQNA GLTLLGNFVT WNPGEHASAC DLSGASCA