Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1675 |
Symbol | |
ID | 3673062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1761469 |
End bp | 1763886 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637710364 |
Product | Lon-A peptidase |
Protein accession | YP_315433 |
Protein GI | 74317693 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La [TIGR00764] lon-related putative ATP-dependent protease |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0439877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAGCG ACAACGTATC CACGGAAGAG ATCGATCTGC CACTGTTGCC GCTTAGGGAC GTGGTGGTGT TCCCGCATAT GGTCATCCCC TTGTTCGTGG GGCGGCCGAA GTCGATCAAG GCGCTGGAAA CCTCGATGGA ATCCGGCAAG AGCATCCTCC TCGTCGCGCA AAAAACGGCA GCGCAGGACG ACCCGACCCC CGACGACCTC TACGACACCG GCAGCGTCGC CACCGTGCTG CAGATGCTGA AACTGCCCGA CGGTACCGTG AAGGTGCTGG TCGAAGGCAA TCAGCGCGCG CGCGTGCTCA ACGTCGCGGA TACGGGCACG CATCTGAGCG CGCGCGCGCG CATCCTGCCC GCGGAAGGCG AGGAGTTGGT CGAAGTCGAG GCGATGCGTC GCGCGCTCCT CACCCAGTTC GATCAGTACG TCAAACTGAA CAAGAAGATC CCGCCGGAAA TCCTGACCTC GCTTTCGGGG ATCGACGAGG GCGGGCGCCT GGCCGACACC ATCGTCGCGC ACCTGCCGCT CAAGCTCGAG CAGAAGCAGG AAGTGCTCGA GATGATCGGC GTCAACAAGC GGCTCGAGCA TCTGCTCGGC CTGCTCGAGG GCGAGCTCGA CATTCTCCAG GTCGAAAAGC GGATCCGTGG CCGCGTCAAG CGGCAGATGG AGAAGAGCCA GCGCGAGTAC TACCTGAACG AGCAGGTCAA GGCGATTCAG AAAGAGCTCG GCGACATCGA GGAAGGCGCT GAGCTGGAAG AGCTCGACAA GCGAATCCGG CAGGCGAGCA TGTCCAAGGA AGCCGAGGCC AAGGCGCTCG GCGAACTGAA GAAGCTGCGT ATGATGTCGC CGATGTCGGC GGAGGCGACT GTGATCCGCA GCTACATCGA AGCCATGGTC GGGCTGCCGT GGAAAAAGAA AACCAAGATC AGCAAGGACC TGGCGAAGGC CGAGAAAGTG CTCGATCAGG ATCACTACGG TCTCGACAAG GTCAAGGAAC GCATCCTCGA ATATCTCGCC GTGCAGCAGC GCGTCGACAA GGTCAAGGCG CCGATCCTGT GTCTGGTCGG GCCGCCCGGT GTCGGCAAGA CCTCGCTCGG GCAGTCGATC GCGCGGGCGA CCAACCGTAA GTTCGTGCGC ATGGCGCTCG GCGGCGTACG TGATGAATCC GAGATCCGCG GCCACCGCCG CACCTACATC GGATCGATGC CCGGCAAGAT CCTGCAGAGC CTGACCAAGG TCGGCGTGAA GAACCCGCTA TTCCTGCTCG ACGAGGTCGA CAAGATGGGA CAGGACTTCC GCGGAGACCC GTCGTCGGCC CTGCTTGAGG TGCTCGATCC GGAGCAGAAC CACACCTTCC AGGATCACTA CGTCGAGGTC GAATACGACC TGTCGGACGT GATGTTCGTC GCGACCGCGA ACTCGCTCAA TCTGCCCGCG CCGCTGCTCG ATCGGATGGA AGTGATCCGC CTTTCGGGTT ACACCGAAGA CGAGAAGATC AATATCGCCG AGCGTTACCT GGTGCCCAAG CAACTCAAGG TCAACGGCAT CAAGGACGGC GAGCTTTCGA TCGCCGAGTC GGCCATTCGT GACATCGTCC GTTACTACAC GCGGGAAGCC GGCGTGCGCA GCCTCGAGCG CGAAATATCC AAGGTCTGCC GCAAGGCGGT CAAGGCGCTT CTGCTCAAGC GGCAAAGCAC GAAAATCGCC GTCACCTCGC GCAACCTGGA GAAGTATCTC GGTGTCCGTC GCTTCAGCTT CGGGGTCGCG GAGAAGAACA ACCAGGTTGG ACAGGTCACG GGCCTTGCCT GGACCGAGGT CGGCGGCGAA CTGCTGACGA TCGAAGCCGT GGCCCTGCCC GGGCGCGGCA AGATGACGAC CACCGGCAAG CTCGGCGAAG TCATGCAGGA GTCGATCCAG GCTGCGCTCT CGGTCGTGCG GTCGCGCTCG CGCAAGTTGG GAATCCAGGA GGATTTCTAT CAGAAGCGCG ATATCCACAT CCACCTGCCG GAAGGCGCGA CGCCGAAAGA CGGCCCCTCG GCCGGCATTG CAATCTGTAC GTCGATGGTC TCGATCCTCA CCGGAATCCC GGTGCGCGCC GATGTCGCGA TGACCGGCGA GATCACGCTA CGGGGCGAGG TGCTGCCGAT CGGCGGGCTG AAGGAGAAGC TGCTCGCCGC GCATCGTGGC GGCATCAAGA CGGTGTTGAT CCCGCAGGAG AACGTCAAGG ACCTCACCGA CATTCCCGAC AACATCAAGA ACAAGCTCGA CATCCATCCC GTCAAGTGGA TCGATCAGGT GCTCGAACTC GCGCTCGAAC ATGTGCCCGA GCCGCTGAGC GAGGAATCGG AGTCGGAAAC CCCCGCGATC GCGGTTTCCG AGGAGGGCGG CACGGCCGCA AGGGCGCTGA AACACTAG
|
Protein sequence | MMSDNVSTEE IDLPLLPLRD VVVFPHMVIP LFVGRPKSIK ALETSMESGK SILLVAQKTA AQDDPTPDDL YDTGSVATVL QMLKLPDGTV KVLVEGNQRA RVLNVADTGT HLSARARILP AEGEELVEVE AMRRALLTQF DQYVKLNKKI PPEILTSLSG IDEGGRLADT IVAHLPLKLE QKQEVLEMIG VNKRLEHLLG LLEGELDILQ VEKRIRGRVK RQMEKSQREY YLNEQVKAIQ KELGDIEEGA ELEELDKRIR QASMSKEAEA KALGELKKLR MMSPMSAEAT VIRSYIEAMV GLPWKKKTKI SKDLAKAEKV LDQDHYGLDK VKERILEYLA VQQRVDKVKA PILCLVGPPG VGKTSLGQSI ARATNRKFVR MALGGVRDES EIRGHRRTYI GSMPGKILQS LTKVGVKNPL FLLDEVDKMG QDFRGDPSSA LLEVLDPEQN HTFQDHYVEV EYDLSDVMFV ATANSLNLPA PLLDRMEVIR LSGYTEDEKI NIAERYLVPK QLKVNGIKDG ELSIAESAIR DIVRYYTREA GVRSLEREIS KVCRKAVKAL LLKRQSTKIA VTSRNLEKYL GVRRFSFGVA EKNNQVGQVT GLAWTEVGGE LLTIEAVALP GRGKMTTTGK LGEVMQESIQ AALSVVRSRS RKLGIQEDFY QKRDIHIHLP EGATPKDGPS AGIAICTSMV SILTGIPVRA DVAMTGEITL RGEVLPIGGL KEKLLAAHRG GIKTVLIPQE NVKDLTDIPD NIKNKLDIHP VKWIDQVLEL ALEHVPEPLS EESESETPAI AVSEEGGTAA RALKH
|
| |