Gene Tbd_1675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1675 
Symbol 
ID3673062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1761469 
End bp1763886 
Gene Length2418 bp 
Protein Length805 aa 
Translation table11 
GC content62% 
IMG OID637710364 
ProductLon-A peptidase 
Protein accessionYP_315433 
Protein GI74317693 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0439877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGCG ACAACGTATC CACGGAAGAG ATCGATCTGC CACTGTTGCC GCTTAGGGAC 
GTGGTGGTGT TCCCGCATAT GGTCATCCCC TTGTTCGTGG GGCGGCCGAA GTCGATCAAG
GCGCTGGAAA CCTCGATGGA ATCCGGCAAG AGCATCCTCC TCGTCGCGCA AAAAACGGCA
GCGCAGGACG ACCCGACCCC CGACGACCTC TACGACACCG GCAGCGTCGC CACCGTGCTG
CAGATGCTGA AACTGCCCGA CGGTACCGTG AAGGTGCTGG TCGAAGGCAA TCAGCGCGCG
CGCGTGCTCA ACGTCGCGGA TACGGGCACG CATCTGAGCG CGCGCGCGCG CATCCTGCCC
GCGGAAGGCG AGGAGTTGGT CGAAGTCGAG GCGATGCGTC GCGCGCTCCT CACCCAGTTC
GATCAGTACG TCAAACTGAA CAAGAAGATC CCGCCGGAAA TCCTGACCTC GCTTTCGGGG
ATCGACGAGG GCGGGCGCCT GGCCGACACC ATCGTCGCGC ACCTGCCGCT CAAGCTCGAG
CAGAAGCAGG AAGTGCTCGA GATGATCGGC GTCAACAAGC GGCTCGAGCA TCTGCTCGGC
CTGCTCGAGG GCGAGCTCGA CATTCTCCAG GTCGAAAAGC GGATCCGTGG CCGCGTCAAG
CGGCAGATGG AGAAGAGCCA GCGCGAGTAC TACCTGAACG AGCAGGTCAA GGCGATTCAG
AAAGAGCTCG GCGACATCGA GGAAGGCGCT GAGCTGGAAG AGCTCGACAA GCGAATCCGG
CAGGCGAGCA TGTCCAAGGA AGCCGAGGCC AAGGCGCTCG GCGAACTGAA GAAGCTGCGT
ATGATGTCGC CGATGTCGGC GGAGGCGACT GTGATCCGCA GCTACATCGA AGCCATGGTC
GGGCTGCCGT GGAAAAAGAA AACCAAGATC AGCAAGGACC TGGCGAAGGC CGAGAAAGTG
CTCGATCAGG ATCACTACGG TCTCGACAAG GTCAAGGAAC GCATCCTCGA ATATCTCGCC
GTGCAGCAGC GCGTCGACAA GGTCAAGGCG CCGATCCTGT GTCTGGTCGG GCCGCCCGGT
GTCGGCAAGA CCTCGCTCGG GCAGTCGATC GCGCGGGCGA CCAACCGTAA GTTCGTGCGC
ATGGCGCTCG GCGGCGTACG TGATGAATCC GAGATCCGCG GCCACCGCCG CACCTACATC
GGATCGATGC CCGGCAAGAT CCTGCAGAGC CTGACCAAGG TCGGCGTGAA GAACCCGCTA
TTCCTGCTCG ACGAGGTCGA CAAGATGGGA CAGGACTTCC GCGGAGACCC GTCGTCGGCC
CTGCTTGAGG TGCTCGATCC GGAGCAGAAC CACACCTTCC AGGATCACTA CGTCGAGGTC
GAATACGACC TGTCGGACGT GATGTTCGTC GCGACCGCGA ACTCGCTCAA TCTGCCCGCG
CCGCTGCTCG ATCGGATGGA AGTGATCCGC CTTTCGGGTT ACACCGAAGA CGAGAAGATC
AATATCGCCG AGCGTTACCT GGTGCCCAAG CAACTCAAGG TCAACGGCAT CAAGGACGGC
GAGCTTTCGA TCGCCGAGTC GGCCATTCGT GACATCGTCC GTTACTACAC GCGGGAAGCC
GGCGTGCGCA GCCTCGAGCG CGAAATATCC AAGGTCTGCC GCAAGGCGGT CAAGGCGCTT
CTGCTCAAGC GGCAAAGCAC GAAAATCGCC GTCACCTCGC GCAACCTGGA GAAGTATCTC
GGTGTCCGTC GCTTCAGCTT CGGGGTCGCG GAGAAGAACA ACCAGGTTGG ACAGGTCACG
GGCCTTGCCT GGACCGAGGT CGGCGGCGAA CTGCTGACGA TCGAAGCCGT GGCCCTGCCC
GGGCGCGGCA AGATGACGAC CACCGGCAAG CTCGGCGAAG TCATGCAGGA GTCGATCCAG
GCTGCGCTCT CGGTCGTGCG GTCGCGCTCG CGCAAGTTGG GAATCCAGGA GGATTTCTAT
CAGAAGCGCG ATATCCACAT CCACCTGCCG GAAGGCGCGA CGCCGAAAGA CGGCCCCTCG
GCCGGCATTG CAATCTGTAC GTCGATGGTC TCGATCCTCA CCGGAATCCC GGTGCGCGCC
GATGTCGCGA TGACCGGCGA GATCACGCTA CGGGGCGAGG TGCTGCCGAT CGGCGGGCTG
AAGGAGAAGC TGCTCGCCGC GCATCGTGGC GGCATCAAGA CGGTGTTGAT CCCGCAGGAG
AACGTCAAGG ACCTCACCGA CATTCCCGAC AACATCAAGA ACAAGCTCGA CATCCATCCC
GTCAAGTGGA TCGATCAGGT GCTCGAACTC GCGCTCGAAC ATGTGCCCGA GCCGCTGAGC
GAGGAATCGG AGTCGGAAAC CCCCGCGATC GCGGTTTCCG AGGAGGGCGG CACGGCCGCA
AGGGCGCTGA AACACTAG
 
Protein sequence
MMSDNVSTEE IDLPLLPLRD VVVFPHMVIP LFVGRPKSIK ALETSMESGK SILLVAQKTA 
AQDDPTPDDL YDTGSVATVL QMLKLPDGTV KVLVEGNQRA RVLNVADTGT HLSARARILP
AEGEELVEVE AMRRALLTQF DQYVKLNKKI PPEILTSLSG IDEGGRLADT IVAHLPLKLE
QKQEVLEMIG VNKRLEHLLG LLEGELDILQ VEKRIRGRVK RQMEKSQREY YLNEQVKAIQ
KELGDIEEGA ELEELDKRIR QASMSKEAEA KALGELKKLR MMSPMSAEAT VIRSYIEAMV
GLPWKKKTKI SKDLAKAEKV LDQDHYGLDK VKERILEYLA VQQRVDKVKA PILCLVGPPG
VGKTSLGQSI ARATNRKFVR MALGGVRDES EIRGHRRTYI GSMPGKILQS LTKVGVKNPL
FLLDEVDKMG QDFRGDPSSA LLEVLDPEQN HTFQDHYVEV EYDLSDVMFV ATANSLNLPA
PLLDRMEVIR LSGYTEDEKI NIAERYLVPK QLKVNGIKDG ELSIAESAIR DIVRYYTREA
GVRSLEREIS KVCRKAVKAL LLKRQSTKIA VTSRNLEKYL GVRRFSFGVA EKNNQVGQVT
GLAWTEVGGE LLTIEAVALP GRGKMTTTGK LGEVMQESIQ AALSVVRSRS RKLGIQEDFY
QKRDIHIHLP EGATPKDGPS AGIAICTSMV SILTGIPVRA DVAMTGEITL RGEVLPIGGL
KEKLLAAHRG GIKTVLIPQE NVKDLTDIPD NIKNKLDIHP VKWIDQVLEL ALEHVPEPLS
EESESETPAI AVSEEGGTAA RALKH