Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1668 |
Symbol | |
ID | 3673053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1751359 |
End bp | 1753338 |
Gene Length | 1980 bp |
Protein Length | 659 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637710355 |
Product | oligopeptidee ABC transporter, ATP-binding protein |
Protein accession | YP_315426 |
Protein GI | 74317686 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCGC TGTTGCAGGT CGACCGGCTC GTCACCGCGT TCGGCGAGGG TAAAGACGCC GTGGGCGTCG TCGACGGGGT GTCGTTCCGC GTCGACGCGG GCGAGACCTA CGCGCTGCTC GGCGAATCCG GCTGCGGCAA GTCGATGACG GCGCTGTCGC TGATGCGGCT CCTTCCGGAC GGCGGGCGCA TCGTTTCGGG CGAGATCCGG CTCGGCGAAA CCGACGTGCG GGCGCTGCCG GAACGCGAGA TGCGCCGGGT CCGCGGCGGG CAGATGGGGA TGATCTTTCA GGAACCGATG CTCGCGCTGA ATCCGGTCGC CAACGTCGGC GCTCAAATCG TCGAGGCGCT TGCACTGCAC CAGCGGCGCA CGGGCCGCGA CGCCCTCGCG GCGGCGCGTG CGCTGCTCGA GTCGGTCGGC GTGCCCGACC CGGAGCGTCG GCTCGATGCC TATCCGTTCG AACTTTCCGG CGGTCTGCGC CAGCGCGTGA TGATCGCGAT GGCGCTCGCC GGCCCGCCGC GCCTGCTGAT CGCCGACGAG CCGACGACGG CGCTGGACGT GACGATCCAG GCGCAGGTGC TCGAGCTGCT GCGTGGCCTG CGCGCCGAGC GCCAGATGGG AATGCTGCTG ATCACGCACG ACCTTGGCGT CGTGGCGGAG AACGCCGATC GCGTCGGCGT CATGTACGCC GGCGAACTGC TCGAGGAGGG GCCGCGCGAG ACGTTCTTCG CCGCGCCGCA GCACCCCTAC AGCCGCATGC TGTTCGAGGC CCTGCCACGG CCGGGGGACC ATGGGCGGCT CGTGACGATT CCCGGTCAGG TGCCGAAGCT CGATGCGCGG ATGTCCGGCT GTCGGTTTGC CCCACGCTGT CCGAGCGCGA TCGCGCGTTG CCGCGAGGAG GCGCCGGACT GGCAGGTGCG CGGAGGACAA CGCGTGCGTT GTCATCTGGC CGGCGAGCTG CCAACGCAGG GGGCACCTGC GGTCTCGCCA CCGCCCGGTT CGGCGCGGGA CGCGGCACCG CTGCTGCAGG TGGAGGGACT GAAGGTCTAT TTTCCGATCC GCCGCGGCCT GATCCAGCGC ACGATCGGCC ACGTTCGCGC GGTCGACGAC GTCTCGCTGT CGATCCGTGC CGGGCGTACG CTCGCGCTGG TCGGCGAATC CGGATGCGGC AAGACCACCG CCGGTAAGGC GCTGCTGCGC CTGATCGAGC CGACCGGGGG GCGTGTCCTG CTCGGCGGCG AGCCGATTAC GCCGGCCAAC GCGCGCACGC TGCGGCGCCA GGCGCAAATG GTCTTCCAGG ACCCCTACAG CTCGCTAAAC CCGCGCATGC GCGTCGAGGA AATCGTGCTC GAAGGCATGG ATGCCCTGCG CGTTGGGGCG GAGCGCGGGC GGCGCGAAGC GGTGGCAGCC GTGCTGCGCC AAGTCGGGTT GCCTGATGAT GCCGGCGGCC GCTATCCGCA CGCCTTCTCT GGCGGGCAAC GCCAGCGGAT TGCGATCGCG CGCGCGCTCG CCGTCTCGCC GCGACTGTTG ATCTGCGACG AGCCGACGAG CGCACTCGAC GTCTCGGTCC AGGCCCAGAT ACTCAATCTG CTCAAAGATC TGCAGGAAAG CCTGGGGCTC GCCTACCTCT TCATCACCCA CAACCTCGGC GTCGTCGAAT ATCTCGCGCA CGAGGTGGCC GTGATGTATC TCGGCCGCAT CGTCGAGCAG GGGCCCGCCG CCGAGGTGCT GCGCGCGCCG CGCCACCCGT ACACCCAGGC GCTCGTCAGC GCCATCCCGC GCATCGATGG CGCAAGCGGG CTGGCGACGC TACATGTGGG CGGTGACCAG CCGTCGCCGC TCGCGCCGCC GCCGGGCTGC CACTTTCACC CGCGCTGCCC GCGCGCGGGC GACCTGTGCC GGCGCGATTA CCCGGAACAG ACGCGAGCCG GGGACGGGCA TTGGGTGCGG TGTCACTGGG TGGCGGGCAG GCTCGGATGA
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Protein sequence | MKPLLQVDRL VTAFGEGKDA VGVVDGVSFR VDAGETYALL GESGCGKSMT ALSLMRLLPD GGRIVSGEIR LGETDVRALP EREMRRVRGG QMGMIFQEPM LALNPVANVG AQIVEALALH QRRTGRDALA AARALLESVG VPDPERRLDA YPFELSGGLR QRVMIAMALA GPPRLLIADE PTTALDVTIQ AQVLELLRGL RAERQMGMLL ITHDLGVVAE NADRVGVMYA GELLEEGPRE TFFAAPQHPY SRMLFEALPR PGDHGRLVTI PGQVPKLDAR MSGCRFAPRC PSAIARCREE APDWQVRGGQ RVRCHLAGEL PTQGAPAVSP PPGSARDAAP LLQVEGLKVY FPIRRGLIQR TIGHVRAVDD VSLSIRAGRT LALVGESGCG KTTAGKALLR LIEPTGGRVL LGGEPITPAN ARTLRRQAQM VFQDPYSSLN PRMRVEEIVL EGMDALRVGA ERGRREAVAA VLRQVGLPDD AGGRYPHAFS GGQRQRIAIA RALAVSPRLL ICDEPTSALD VSVQAQILNL LKDLQESLGL AYLFITHNLG VVEYLAHEVA VMYLGRIVEQ GPAAEVLRAP RHPYTQALVS AIPRIDGASG LATLHVGGDQ PSPLAPPPGC HFHPRCPRAG DLCRRDYPEQ TRAGDGHWVR CHWVAGRLG
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