Gene Tbd_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1638 
SymbolflgA 
ID3673023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1722999 
End bp1723712 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content73% 
IMG OID637710325 
Productflagellar basal body P-ring biosynthesis protein FlgA 
Protein accessionYP_315396 
Protein GI74317656 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID[TIGR03170] flagella basal body P-ring formation protein FlgA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.594164 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGCG CATCATCTTC CGTGGGCAAA TGGCTGCGCG CGACCGCGGC GGCCGTCGCG 
GCGTGCGGGC TCGCCGGCAA CGCGAACGCT GCGGCGCAGC AGGACCCGGC GGCCGTGCAG
GCCCAGGCCG AACGTTTTCT GAAAATGCAG AGCAGCGGCC TGCCCGGGAC GCTGACCGTC
GAGGTCAAGC CGCCGCGTGC GGCCCTACCC GCGTGCGCGA GCCTCGAGGC GTTTCAAACG
GCCGGGGCCC GCAGCATCGG TCGCACGACC GTCGGCGTGC GCTGCCTCGC GCCGCAAAGC
TGGACGGTCT ACCTGGGGGC CGACGTGCGG CTGATCGCGG CCTATGCCGT GACGCGCCAC
CCGGTGCCCG CCAACCACGT GCTGACCGAA GCCGATCTCA CGCTTCGCGA AGGCAATCTC
GGCAACCTGC CGACCGACGT CGCGCGCGAC GTGGGCGCGC TGCTCGGCTA CCGCACGGTA
TCGGGCCTCG CTGCCGGCGC GCCCTTGCGC GCCGCGCTCT TGCGCGCGCC GCTCGCCGTG
CAACAAGGCC AGACGACGCG CCTCGTGCTC AACGGACCGG GGTTTTCCGT GCAAACCGAA
GGCCAGGCGC TCGCCAACGC CGGGCGCGGC GAGCGCGTGC GCGTGAAGAC CCGCTCGGGG
CAGGTCGTCA GTGGCGTCGC ACAGGACGGC CAGCAGGTCG TCGTCGCGTT TTGA
 
Protein sequence
MASASSSVGK WLRATAAAVA ACGLAGNANA AAQQDPAAVQ AQAERFLKMQ SSGLPGTLTV 
EVKPPRAALP ACASLEAFQT AGARSIGRTT VGVRCLAPQS WTVYLGADVR LIAAYAVTRH
PVPANHVLTE ADLTLREGNL GNLPTDVARD VGALLGYRTV SGLAAGAPLR AALLRAPLAV
QQGQTTRLVL NGPGFSVQTE GQALANAGRG ERVRVKTRSG QVVSGVAQDG QQVVVAF