| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1618 |
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| Symbol | |
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| ID | 3673003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1699711 |
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| End bp | 1701384 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710305 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_315376 |
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| Protein GI | 74317636 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.126465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCCA ATCAACCCGT AACCAACGTC GAATACGTCC TGAAAGATAC CGAAACCGTG
GTGTCGAAAA CGGACCTGCG CGGCAACATC ACCTACGTCA ACCAGGATTT CGTCGACGTC
AGCGGCTTCA GCGAAGCCGA ACTGATCGGC GCGCCGCAGA ACATCGTGCG TCACCCCGAC
ATGCCCGAGG AGGCTTTCGC CGACCTCTGG CGGACGCTCC AGAGCGGCAA GGTGTGGAGC
GGCCTGGTCA AGAATCGCTG CAAGAACGGC GACTACTACT GGGTCGATGC CGATGTGGCA
CCGCTCATCG AGAATGGAAA GACCGTCGGC TATGCTTCGA TCCGCAGCAA GCCGGACCGT
GAGCAGGTCA AGGAAGCCGA GCGGGTGTAT CGCGCTGTGA AGGCGGGCGA CAAGGGCCTT
GGGATCGTCG AGGGCAAGGC GATCAAGTGC TCGTCGCTCG ACCGCTGCTT CGCGCGCCGT
GCGCCGGCGC TCAAGACCCT GCTTGCGATC GCTTCGTCGT CGATGGCGCT CATTTTCGTG
GTGATGGCGG TCCTGGCATG GCTTGCGACG ACCGAGACCA ACGGCCAGTT CACAGGCTGG
CTGATGGGGA TCGCAGGGCT CGGCGTGCCG CTCGCCGCCT TGTTCGCAGT CCTGTCGTAT
CGCAGCGTCG TCATACCGCT CGACCGCGTT CGCGCCGACA TCGAGCGCAT GAGCGCGGGC
GACCTCACCG GCCGCATCGT CGCGGGGGGG GCTGACGAAC TCGTCAGACT GATGCAGTCG
CTGCGCGTGC TGCAGATCAA CATGAAGCTC CTGATCGGCC AGATCAAGCA GAGCACAGAC
CTCGTCGGCA ACGGCGCGGC CGAAATCGCC AAAGGCAACG CGGATCTGTC GGCGCGGACC
GAATCGCAGG CGTCGAGTCT CGAGGAGACC GCAAGCTCGC TCGAGGAGCT GACCGGCACG
GTCAAGCAGA ACGCCGAGGG GACGCGTCAC GCGAGCCAGC TCGTCACCTC TACCGCACAG
ATCGCGGCAA ACGGCGGCGA GGTTGTCGGC AAGGTGATCA CCACCATGGG CTCGATCAAG
GAAAGCTCGC GCAAGATCTC CGACATCATT GGCGTCATCG ATGGGATCGC CTTCCAGACC
AACATCCTCG CCTTGAACGC AGCCGTCGAA GCAGCGCGCG CGGGCGAGCA GGGACGAGGC
TTCGCCGTCG TCGCGACCGA GGTGCGCAAC CTGGCGCAGC GCAGCGCGGG TGCGGCCAAG
GAGATCAAGA CCTTGATCAA CGACTCGGTC GCCCAGGTCG ACGCCGGCAG GAAGCTCGTC
GACGAGGCGG GCGACGCGAT GGACGACATC GTGACCTCGG TGCAACTGGT CGCCGACATC
ATTGCCGGCA CGGCGAGTGC GAGCCAGGAG CAGAGTACCG GGATCGAGCA GGTCAACCAG
GCCGTGGCGC AGATGGACGA ACTCACCCAG CAGAACGCGG CGCTGGTCGA ACAGGTCGCG
GCCGCGTCCG AGACCCTGCA GGATCAGGCG GTCAAACTCG CGGCCATCGT CGACACGTTC
AAACTCGTGA GCGGCCGGGA CGCGGGACGC CGCCCCGGCG CAGGCCGTGC CCTCGCATCC
GGAACGAACA CGGCGCTTTC GGGCGGAGCG AGCGGCGCAA TGCAAGCGGC GTAG
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| Protein sequence | MRSNQPVTNV EYVLKDTETV VSKTDLRGNI TYVNQDFVDV SGFSEAELIG APQNIVRHPD
MPEEAFADLW RTLQSGKVWS GLVKNRCKNG DYYWVDADVA PLIENGKTVG YASIRSKPDR
EQVKEAERVY RAVKAGDKGL GIVEGKAIKC SSLDRCFARR APALKTLLAI ASSSMALIFV
VMAVLAWLAT TETNGQFTGW LMGIAGLGVP LAALFAVLSY RSVVIPLDRV RADIERMSAG
DLTGRIVAGG ADELVRLMQS LRVLQINMKL LIGQIKQSTD LVGNGAAEIA KGNADLSART
ESQASSLEET ASSLEELTGT VKQNAEGTRH ASQLVTSTAQ IAANGGEVVG KVITTMGSIK
ESSRKISDII GVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVATEVRN LAQRSAGAAK
EIKTLINDSV AQVDAGRKLV DEAGDAMDDI VTSVQLVADI IAGTASASQE QSTGIEQVNQ
AVAQMDELTQ QNAALVEQVA AASETLQDQA VKLAAIVDTF KLVSGRDAGR RPGAGRALAS
GTNTALSGGA SGAMQAA
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