Gene Tbd_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1561 
Symbol 
ID3672041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1643854 
End bp1644204 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content67% 
IMG OID637710247 
Producthypothetical protein 
Protein accessionYP_315319 
Protein GI74317579 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.150485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.132727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAC GCGAACGCCT GATCTGCCGC GCCGAAGACC TGGCCGAGGC GGGGCAGGGC 
GTCCGTTTCG ACGTGCAGCG CGGTGACCTT CGCCGGCCCG CCTTCGTCGT CCGCTTCGAG
GGGCAGCCCC ACGCGTTTCT CAATCAGTGC GGCCACATAC CGGTCGAGCT CGACTGGCAG
GAGGGGCAGT TCTTCGACGA CTCGCGGCTA TACTTGGTCT GCGCCACGCA CGGCGCGCTT
TACCATCCGC GCGACGGCCG CTGTGTCGGC GGGCGCTGCG CCGGCCGAGG CCTGATCCCC
CTATCCGTCG TTGAACGCGA CGGCAATGTT TACCTGATGG AAGAAGAATG A
 
Protein sequence
MARRERLICR AEDLAEAGQG VRFDVQRGDL RRPAFVVRFE GQPHAFLNQC GHIPVELDWQ 
EGQFFDDSRL YLVCATHGAL YHPRDGRCVG GRCAGRGLIP LSVVERDGNV YLMEEE