Gene Tbd_1488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1488 
Symbol 
ID3672901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1575949 
End bp1576998 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content60% 
IMG OID637710173 
Producthypothetical protein 
Protein accessionYP_315246 
Protein GI74317506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0507224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTAA AACAGCCCGA AACCGTCGAC GAACCCGCCT CGACGGTTGC TCATGAAACC 
AAACCGCTCG ATGGGACGCC GAGCGCCCAA GCCGTTGCCC ACTGCCTGCG CGACTACGTC
GCCGCCCATG ACGACGGCAG CAAGGCGTTT CGATTGCTGG CAGCCCTGGC CAAAGAGACG
CTGGATCAAC TGAAAAAAAA CGGGGGTGGG AAGATCGGGA CCAAGGCCAT CTATCTGGCC
GCGCAGATCG ACACCGAAAC CGACAAGGCC ACCCGCTGGG TCAGCGAGGC GTGGAAAGCG
TGGGAAGGAA AACGGGATGA ACGCTTAAGC GGTCTGCAAG ACTTCGCCGC AAACTACGGC
CTCAACGTCT ATCCCTGGCC GGAAAAGAGA GGGGATGGCA AAGGCGGCGC GGGCCGCTCA
TCCCTTTACG CAGTCGAAGT CCGGCCGCTG GTCAGGGGGC CAGCCTTGGC TACACCGAAC
GCCGACATCC ACTACATCCG CGAAACGACC CCCAAGCCCG TCTGGTGGGC GCGCCGGTTC
TTTTCCGGGG AATTCCACCT GACGGGCTGG CGAAAGGCCC TCTTCGTGAC CCCGGCTATC
GTTTCCCTGA TTTTCGCGGT CGTAGTCATC CTCGCCGTGT GGTTAACCCT GTCCCATCAG
CAAGCGATTC CAACCAATCG TATTCTGGTT CTGGTTACCT CCGCCGCCCT GATCGGCGTG
GTTGCCTGGC GGATGGTCAT GGCCGTAGGC CGGCTGGGTG ACAAGCGCAT CACCATGGCG
CCGGATATCC TGATTGGCTT TCATGAATAC GGTGTTCAAC TTGAACTCAC CAGACTCGAC
ACCGCTCCCT GCTCTGCCAG CCGGCTAGGC CTAGTGCGCT ATGCCGCAAC CTGCCCTGTC
TGCAATGCAA AGGTTCAAGT GGAAAGTGGC GGGCGGGAAT TCCATGGGCG GCTTGTGGGA
CGGTGCCAGG AAAGCCCGGA CGAACATGTA TTCAGCTTTG ACCGGGTTAC GCGGACAGGT
ACAAACCTAC GATTTGAGTA TCGCGTCTGA
 
Protein sequence
MLVKQPETVD EPASTVAHET KPLDGTPSAQ AVAHCLRDYV AAHDDGSKAF RLLAALAKET 
LDQLKKNGGG KIGTKAIYLA AQIDTETDKA TRWVSEAWKA WEGKRDERLS GLQDFAANYG
LNVYPWPEKR GDGKGGAGRS SLYAVEVRPL VRGPALATPN ADIHYIRETT PKPVWWARRF
FSGEFHLTGW RKALFVTPAI VSLIFAVVVI LAVWLTLSHQ QAIPTNRILV LVTSAALIGV
VAWRMVMAVG RLGDKRITMA PDILIGFHEY GVQLELTRLD TAPCSASRLG LVRYAATCPV
CNAKVQVESG GREFHGRLVG RCQESPDEHV FSFDRVTRTG TNLRFEYRV