| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1474 |
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| Symbol | |
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| ID | 3673587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1559811 |
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| End bp | 1561955 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710159 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_315232 |
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| Protein GI | 74317492 |
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| COG category | [I] Lipid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0398] Uncharacterized conserved protein
[COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.458046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCGCA CCCGGGCAAT GGGCAGGCTA GTCGAAGGAA AAAACTGCTG GCGTTACGAA
CATGCGAACC GAGTCGCCTT CCTCGTCGAC GGCGCGGCCT ACTTCGACGC GTTCGGCCGT
GCTGCGTTGC GCGCGCAGCG CTCGATCCTG ATCGTCGGCT GGGATTTCAA CAGCCGCACG
CGCCTGTGGC ACGACGACGC GCCACGCGGC GTGCCGCCGG TGCTCGGCGA CTTCCTGGAT
TTTCTCGTCA AGCGCAATCA CGCGCTGCAG GTCCACATCC TCGACTGGGA TTTTCCGATG
ATCTACGCGG TCGACCGCGA GGCGCCGCCG CTCTTCGGAC TCGGCTGGCA GCCGCGTCAT
CACATCCATT TTCATTTCGA CAGCCATTTC CCGGTCGGCG GATCGCATCA TCAGAAGATC
GTCGTGATCG ACGACGCGGT CGCCTTCGTC GGCGGCATCG ATCTCGCGGC GGACCGCTGG
GACACGCCCG AGCACCGCGC CGACGACCCG CGCCGCATGC GCGGCGACGC CGCCTACGGC
CCGGTGCACG ACGTGATGAT CGCGGTCGAC GGCGACGCAG CCGCTGCGCT CGGCGATCTC
GCTCGCACGC GCTGGCTGCG CGGAACCGGC GAGCGGCTTC ATGCCCACCC CGGCGAAGGT
GATCCGTGGC CGGCGGAACT CGCGCCCGAG CTCGTCGACG TGCACGTCGG GATCGCGCGC
ACCGAACCCG AGTACGACGG CCTGCCCGAG GTGCGCGAGG TCGAGGCGCT GTATCTCGAC
ATGCTCGACG CGGCGAAAAA GCTGATCTAC ATCGAGAACC AGTATTTCAC GTCGCTGCGC
GTCGGCGCCT GGCTCGAGGA ACGGCTGCGC TGCGAAGACT GCCCGGAAAT CGTGATCGTG
CTGCGGCGCT CGTCCGACGG CTGGCTCGAA GGGCCGACGA TGGGCACGCT GCGCAGCCAG
CTGCTCGAAC GCCTGCGCCG CGCCGACCAC CATGGCCGGC TGCACGTCTA CTATCCCGAC
GTGCCGGGCC TCGGCGAGCG CAGCATCAAC GTGCATGCCA AGCTGTGTAT CGTCGACGAT
GAGATCGTGC GCGTCGGCTC GGCGAATCTC AACAATCGCT CGATGGGTTT CGACACCGAA
TGCGATCTCG CGATCGAGGC CGAGGGCAAT GCGAATGTGC GTGCGGCGAT CGCCGCGTTC
CGCGACCGGC TGCTCGCCGA ACATCTCGAC GTCAGCCCGC GCGAGGTCGC CGCCGCGTTC
GAGCGCGAAG CGACCGCGGC CAAGGCCGTC GACGCGCTGG CACACGGCGA GCGGCGCCTG
CTGCCCTTGA GCTCCGACGT CTGGTCCAGT TCGCTCGCGC CGCTCGCCGA ACTTGCCGAT
CTCGAGCGAC CGGTCGCTCC GGAAGAGCTG ATCAGCCAGT TCTCTCCTGA CGCCCCGGTC
GACGAAAAAC GCGGGCGGCC GCTGCTCGGC GTGCTCGTGG TGCTCGTGGT TTTCGGCGGC
CTGTTTGCGC TCTGGCGCTG GACCCCGCTG TCCGAATACG TCACGCCGAC TGCCGTCGCC
GGCTGGGCCG ACCTGCTGGC GGCCGAGCCG GCCGGCCCCT TGATCGTGAT CGGCGCCTAC
ACGCTGGCGA CGTTCACGAT GTTTCCGCGG CCGTTGATCA CGCTCGCCGC GGTGCTGGCC
TATGGCCCCT TGCAGGGCTT CGCCTATGCG ATGGCCGGGA TGCTGACCGC GGCGATGGTG
ACGTATTACG GCGGGCGCGC ACTGAGCCGC GACACGGTAC GGCGCGTCGC CGGCGCGCGG
CTCAACCGCC TGTCGCGCGA ACTGCGGCGG CGCGGCCTGC TTTCGGTCGT CGCGGTGCGG
CTCGTGCCGA TCGCCCCGTT CATCGTCGTC AACATGGTGG CGGGCGCGGC GCGCATCCGC
GTCGACCATT ACTTCATCGG CACCGCACTC GGCATACTGC CGGGTGCGCT CGTCGCGACG
ATCTTCGGCG GGCAGCTGCA CAGTGCGCTG CGCGATCCGT CGAGCATCAA CTACGCGCTG
GTCGGCATCG TCGTCGCGGC CGCGCTCGTG GCCTTCTTCG TCCTGCGCAA GTGGTTGCGC
AGGCAACTCG CCGCCGACGG GAAAGCGGAC GCCGATGTGG GTTAG
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| Protein sequence | MARTRAMGRL VEGKNCWRYE HANRVAFLVD GAAYFDAFGR AALRAQRSIL IVGWDFNSRT
RLWHDDAPRG VPPVLGDFLD FLVKRNHALQ VHILDWDFPM IYAVDREAPP LFGLGWQPRH
HIHFHFDSHF PVGGSHHQKI VVIDDAVAFV GGIDLAADRW DTPEHRADDP RRMRGDAAYG
PVHDVMIAVD GDAAAALGDL ARTRWLRGTG ERLHAHPGEG DPWPAELAPE LVDVHVGIAR
TEPEYDGLPE VREVEALYLD MLDAAKKLIY IENQYFTSLR VGAWLEERLR CEDCPEIVIV
LRRSSDGWLE GPTMGTLRSQ LLERLRRADH HGRLHVYYPD VPGLGERSIN VHAKLCIVDD
EIVRVGSANL NNRSMGFDTE CDLAIEAEGN ANVRAAIAAF RDRLLAEHLD VSPREVAAAF
EREATAAKAV DALAHGERRL LPLSSDVWSS SLAPLAELAD LERPVAPEEL ISQFSPDAPV
DEKRGRPLLG VLVVLVVFGG LFALWRWTPL SEYVTPTAVA GWADLLAAEP AGPLIVIGAY
TLATFTMFPR PLITLAAVLA YGPLQGFAYA MAGMLTAAMV TYYGGRALSR DTVRRVAGAR
LNRLSRELRR RGLLSVVAVR LVPIAPFIVV NMVAGAARIR VDHYFIGTAL GILPGALVAT
IFGGQLHSAL RDPSSINYAL VGIVVAAALV AFFVLRKWLR RQLAADGKAD ADVG
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