Gene Tbd_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1473 
Symbol 
ID3673586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1559000 
End bp1559821 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content70% 
IMG OID637710158 
Producthypothetical protein 
Protein accessionYP_315231 
Protein GI74317491 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.257293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGTTA GCCGCAAGGG TCACAGCTTC TCGGTGGCTT CCTACAACAT TCACCAGTGC 
GTCGGCGTCG ACCGCCGCCG TGATGCCGCA CGCATCGCAA CGGTGATCCG CGACCTCGAC
TGCGACGCGA TCGGCCTGCA GGAAGTCGAT TCACGGGCCG GGCCGCACGC CGACTCGAAA
CAACTCGAAT ATCTCGCAGA GGCGACCGGC ATGCAGGCGC TCGCCGGGCC GACGATCCTG
CGCCACGACG GCGATTACGG CAACGCCCTG CTGACGCGGC GGCCGATCCT CGCGGTTCGC
CGGCACGACC TTTCGTTCCG CAGCCGCGAA CCGCGCGGCG CGCTCGACGT CGACCTCGAC
GTCCACGGCC ATCGCGTGCG CGTCATCGTC ACCCACCTCG GCCTGCGTCC GGCCGAGCGG
CGCTACCAGG TCAAGCTGCT GCTCAAGCTC CTGCATCCGG TCGAGCCCGG CCAGCCCGTC
GTCGCGCTCG GCGACATCAA CGAATGGCTG CCGCTGAGCC GGCCGCTGCG CTGGATGCAC
GGCCTGCTCG GGCCGCCGCC CTGGCAACGC ACGTTTCCGA CCTTGTTGCC GATGTTCGCG
CTCGACCGCG TCTGGGTGCG GCCGCACAGC GCGCTGGTCG ATCTGCGCGC GCACCGGCGC
AAGCCGGCGC GCATGGCGTC CGACCACTAT CCGCTCAGGG CGGTGATCGC GATGCCGGAG
CCATTCGACC GCCCGAGTGC GCAGGCGAGA GGGGATGGCG GGGGCGAGGC GGAACGGTGC
GCGAGCGAAC CGGTCGTGCG CGAAACACAG CGTGAAACCT AA
 
Protein sequence
MWVSRKGHSF SVASYNIHQC VGVDRRRDAA RIATVIRDLD CDAIGLQEVD SRAGPHADSK 
QLEYLAEATG MQALAGPTIL RHDGDYGNAL LTRRPILAVR RHDLSFRSRE PRGALDVDLD
VHGHRVRVIV THLGLRPAER RYQVKLLLKL LHPVEPGQPV VALGDINEWL PLSRPLRWMH
GLLGPPPWQR TFPTLLPMFA LDRVWVRPHS ALVDLRAHRR KPARMASDHY PLRAVIAMPE
PFDRPSAQAR GDGGGEAERC ASEPVVRETQ RET