Gene Tbd_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1380 
Symbol 
ID3672481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1460268 
End bp1460738 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID637710065 
Productpeptidase M52, hydrogen uptake protein 
Protein accessionYP_315138 
Protein GI74317398 
COG category[C] Energy production and conversion 
COG ID[COG0680] Ni,Fe-hydrogenase maturation factor 
TIGRFAM ID[TIGR00072] hydrogenase maturation protease
[TIGR00140] hydrogenase expression/formation protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0298181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TCGTGCTCGG CATCGGCAAC ACATTGCTTA CCGACGAAGG CGTCGGCGTC 
CACCTGCTCG ACGTCCTTCG CCCCATGCTC GGCGACCTGC ACGGCGTCAC GCTGCTCGAC
GGCGGCACGC TGTCGTTCAC ACTTGCCGCG TCGATTGAGG ATGCCGACGC GCTGATCGTC
GTCGACGCGG CCGAGCTGAA ACGCCGCCCG GGCGAATGGG CGGTGCTGGA AGGGGAGGAG
ATGGACCGGT TCCTGATAGG CGCGCGCAAA GCTTCGGTGC ACGAAGTGGG CCTCGCCGAC
CTGCGCACCA TCGCGCTCCT TGCGGGCCAC TGGCCGGAAC GACGTGCGCT GCTCGCGATC
CAGCCCGCGG TCATCGACTG GGGCGAATTC CCCACGGCCC CGGTCGCGGC CGCCATGCCG
CCCGCATGCG CGGCGATCGC GCACCTGATC CGGGGCTGGC ATGACGCGTG A
 
Protein sequence
MKTLVLGIGN TLLTDEGVGV HLLDVLRPML GDLHGVTLLD GGTLSFTLAA SIEDADALIV 
VDAAELKRRP GEWAVLEGEE MDRFLIGARK ASVHEVGLAD LRTIALLAGH WPERRALLAI
QPAVIDWGEF PTAPVAAAMP PACAAIAHLI RGWHDA