| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1374 |
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| Symbol | |
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| ID | 3672475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1454356 |
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| End bp | 1454940 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637710059 |
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| Product | membrane-bound hydrogenase component hupE |
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| Protein accession | YP_315132 |
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| Protein GI | 74317392 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2370] Hydrogenase/urease accessory protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00671086 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCGAA ATACGATCAG CCGCTGTATC GCGCCCGTCC TCGCGCTGCT CTCCGGTAGC
GCCGCCGCAC ACAGCCTCGA TGCGCCAGCG GGCGGCCTGG CCGCCGGCCT CGCGCATCCT
TTCCTCGGCC TCGACCACCT GCTCGCGTTG CTCGCCGTCG GCCTGTGGGC CACCCAGCAT
AGCGGGCGCG CGCGCTGGGC GATCCCCGGC GCTTTCGCCG GCGCTTTCGC CGGCGCCACG
GCGGTCGGCA CCGCGCTCGC CGCGGCCGGG ATCGTGCTTC CGGCTGCCGA AGCGGCGATT
GCCGTTTCGG TCGTGATACT CGGCCTGCTC GTCGCCGCCC GGCACGCGCA GTCATTGCCT
GCCGCAATGG CGCTCGCAGG CGCGTTTGCC GTCTTCCACG GTTTCGCGCA CGGCATCGAG
ATGCAACAGG CCGCTTCGCC TTTAGCCGCA GGTGCCGGCT TCGTGTTGGG CACCGCGCTC
CTGCACGCGG CAGGTTTTCT CGGCGGGGTG GCGGGGCGGC GCGCAGTCCC TTACGCGGGT
GCTGCGATCG CGGCGAGCGG CCTTGCCCTC ATCCTCGGGC TGTGA
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| Protein sequence | MYRNTISRCI APVLALLSGS AAAHSLDAPA GGLAAGLAHP FLGLDHLLAL LAVGLWATQH
SGRARWAIPG AFAGAFAGAT AVGTALAAAG IVLPAAEAAI AVSVVILGLL VAARHAQSLP
AAMALAGAFA VFHGFAHGIE MQQAASPLAA GAGFVLGTAL LHAAGFLGGV AGRRAVPYAG
AAIAASGLAL ILGL
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