Gene Tbd_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1308 
Symbol 
ID3671880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp1387265 
End bp1387939 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content66% 
IMG OID637709993 
Producthypothetical protein 
Protein accessionYP_315066 
Protein GI74317326 
COG category[S] Function unknown 
COG ID[COG5483] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.164659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGATA AGAGCCCTGC GATGTCGCAC GAGACCGCTT CCCCGCTGGT TCTGACGATC 
GGCCATTCGA CGCATCCGAT CGACGTTTTC ATCGGGCTGC TGCAGGCACA CGGCGCGGCT 
TCGCTGGTCG ATGTGCGCAC GGTGCCGCGC TCGCGGCACA ACCCGCAATT CAACACGGAG 
GCCCTGGCGC AGTCACTCGC CGATGCCGGT CTCGGCTACG TGCATGCGCC CGGTCTCGGC 
GGCCTGCGGC GCGCCAGGCC CGATTCGCCC AACGCCGGAT GGCGCAACGC CTCGTTTCGC 
GGCTATGCCG ACTACATGCA GACAGCCGAC TTCGCGCGCA GCCTCGACGC GTTGATCGCC 
CTCGCGCAGA CGCGGCGAAT CGTCCTGATG TGCGCCGAGG CCGTACCCTG GCGCTGCCAT 
CGTTCGCTCA TCGCGGATGC ACTCGTCCTC CGCGGCTTCC GCGTCGAACA CATCCTGAGC 
GCGACGCGCC GTCAGCTTCA CGCGCTCACA CCATTCGCGC GGGTGAGCGG CGGCACGCTC 
ACCTATCCAC CCGAGGCGGG ATCCGCGCCG GGGCAAGCGA CCGTCGCGAC GGACGGATGT 
TGCCCCAACG AGGGTGGAAC CACTCATATC GAAAATACCG ATGCAAAAGG CCAAAAAAGA 
TCGTTTGTTA AATAG
 
Protein sequence
MSDKSPAMSH ETASPLVLTI GHSTHPIDVF IGLLQAHGAA SLVDVRTVPR SRHNPQFNTE 
ALAQSLADAG LGYVHAPGLG GLRRARPDSP NAGWRNASFR GYADYMQTAD FARSLDALIA 
LAQTRRIVLM CAEAVPWRCH RSLIADALVL RGFRVEHILS ATRRQLHALT PFARVSGGTL 
TYPPEAGSAP GQATVATDGC CPNEGGTTHI ENTDAKGQKR SFVK