| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1282 |
|---|
| Symbol | |
|---|
| ID | 3673372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1348916 |
|---|
| End bp | 1350109 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637709967 |
|---|
| Product | rhodanese-like protein |
|---|
| Protein accession | YP_315040 |
|---|
| Protein GI | 74317300 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCAC CGGATACAAG CGCGAGCCCC GCGAAAGTCT GGGAAAGCCT GCTGCATGCG
GCGCCGCTCT TCATCCTCGA CGTGCGCAAC GCCGACGAAT TCGAGCGCTG GCGCGTCGAA
GGCCCGCGCC CGGTACCGAC GCTCAACGTC CCCTATTACA CACTTCTCGA TCTCGACGCC
GACGACGACG TGGGCGCGGC CGTCACGCGC GGCATACACG CACAGCTCAT GGACAAGGTG
CCGCGCGACC GCCCGATTCT CGCCGTCTGC GCCGAAGGCA ATACGTCCGC TTACGTGGCC
GAAGGCCTGC GCCGCGCCGG CTTCGAGGCG ATGAACCTCG AAGGCGGAAT GGAGGCCTGG
GGCGATTTCT ATTACTCGCG TACGGTCGAG CGCAACGCGC GCTTTTCCCT GTTCCAGGTC
GTGCGGCCGG CGCGCGGCTG CCTGAGCCAT GTTCTCGTCA GCGGGCGTCA CGCGATGGTT
TTCGACCCCG CGCGGCATGT CGCGCATTAC CGCGAACTGG CCGATTCGCT CGGCGCGACG
ATCGAGGCCG TGCTCGACAC CCATCTCCAT GCGGACCATC TGAGTGGCGG GCCTGCCCTC
GGGCGACAGG CCCATGTTCG CTACCACCTG CACCCCTACG ATGCGATCCA CCCGACCGAT
CTTCTGCCCG CGCGCATCGA CTACCGTCCG CTCGAAGCCG GCCAGACGCT GCGCTGCGGC
GAGACCGAGA TCAAGGTGCT GCACTTTCCG GGGCACACCC TCGGCATGGT CGCCTTCCTC
GTCGACGAGC GCTTTCTGCT TAGCGGCGAC AGCCTGTTCC TGACCTCGAT CGCGCGGCCC
GATCTCGGCG GCCGCGCCGA CGCCTGGGCG CCGCTGCTCT ACGCCTCGCT CGCGCGCATG
GCCGCGCTGC CCGACGCGAC CGTCGTGCTG CCAGCGCATT TCAGCGACAT CACCGCGGGC
GACGACGACG GCGTCTACCG CGCGACGCTC GGCGAACTGA AGCGGCGCAA TCCGGGCCTG
CGGAAGCTGG CCGAGGGCGA GGCGGCGTTT CTGGCGCACG TGCTCGCGAG CCTGCCCGAA
TTTCCCGAAG CCTACGTCGA GATCAAGCGC GCCAACGCCG GCCTGGTCGA CGTGGACGAA
CGGCGCGCCC GCGAACTGGA ACTCGGCAAG AACATCTGCG CGCTCGGCCA GTGA
|
|---|
| Protein sequence | MPAPDTSASP AKVWESLLHA APLFILDVRN ADEFERWRVE GPRPVPTLNV PYYTLLDLDA
DDDVGAAVTR GIHAQLMDKV PRDRPILAVC AEGNTSAYVA EGLRRAGFEA MNLEGGMEAW
GDFYYSRTVE RNARFSLFQV VRPARGCLSH VLVSGRHAMV FDPARHVAHY RELADSLGAT
IEAVLDTHLH ADHLSGGPAL GRQAHVRYHL HPYDAIHPTD LLPARIDYRP LEAGQTLRCG
ETEIKVLHFP GHTLGMVAFL VDERFLLSGD SLFLTSIARP DLGGRADAWA PLLYASLARM
AALPDATVVL PAHFSDITAG DDDGVYRATL GELKRRNPGL RKLAEGEAAF LAHVLASLPE
FPEAYVEIKR ANAGLVDVDE RRARELELGK NICALGQ
|
|---|
| |