Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1249 |
Symbol | |
ID | 3673339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1311870 |
End bp | 1312610 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637709934 |
Product | RNA polymerase sigma-70 factor |
Protein accession | YP_315007 |
Protein GI | 74317267 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.923056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACACCG CAAGCGGCAA GACCGCGAAG AGCGAAAAAA ACGATCTGCT CGAGCAGTAC ATGCCGATGG TCAAGCGGCT CGCGCACCAC ATGATGGGCC GGCTGCCGCC CAGCGTCGAG GAGGACGATC TTGTCCAGGC CGGCATGATC GGCCTGCTCG ACGCCGTCAG CCGTTACGAC GAGGCGCAGA GCGCGCAGTT CGAGGCCTAC GCGATCCAGC GCATCCGCGG TTCGATGATC GACGAGTTGC GGCAGTCGGA CTGGATGCCG CGCAGCGCTC GGCAATCGAT GCGCAAGATC GAGCAGGCCA TCGCCGCGCT GCAGCACCAG TTGGGGCGTC AGCCGAGCGA GGGCGAAATC GCCGAGGCGA TGAAGATCCC GCTCGCCGAC TACCAGTCGA TGCTTGGCGA TGCGCGCGGC CACCAGTTGC TTTACTTCGA GGATTTCGGC GAGTCCGACG AGGACGACTC CTTCCTCGAC AAGCAGTCCG CCGACGAGGC GACTATGCCG CTGCCGCAGC TGCTCGACGC CAACCTCAGG GCCTGCATCA TCGCCGGCAT CGAGAACCTG CCCGAGCGCG AGCAGCTCCT GATGTCGCTG TATTACGAAC AGGAACTCAA CCTGCGCGAG ATCGCCGAGG TCTTCGGCGT CAGCGAGTCG CGCATCTGCC AGCTGCACGG CCAGGCGATT GCGCGGCTGC GCGCCCGGCT CAAGGAAGAT TCGTGGATCG CAGCAGCCTG A
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Protein sequence | MYTASGKTAK SEKNDLLEQY MPMVKRLAHH MMGRLPPSVE EDDLVQAGMI GLLDAVSRYD EAQSAQFEAY AIQRIRGSMI DELRQSDWMP RSARQSMRKI EQAIAALQHQ LGRQPSEGEI AEAMKIPLAD YQSMLGDARG HQLLYFEDFG ESDEDDSFLD KQSADEATMP LPQLLDANLR ACIIAGIENL PEREQLLMSL YYEQELNLRE IAEVFGVSES RICQLHGQAI ARLRARLKED SWIAAA
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