| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1221 |
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| Symbol | |
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| ID | 3673310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1274784 |
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| End bp | 1275980 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709905 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_314979 |
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| Protein GI | 74317239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGC GTCTCGACCA ACTCCACCCG TATCCGTTCC AGAAACTGCG CGAGCTGCTC
GCCGGAACCG AGCCGAACCC CGAACTCGCG GCGATCAACC TGTCGATCGG CGAACCCAAA
CACCCGACCC CGGGCTTCAT CCGCGACGCG CTGGTCGGCG GCCTCGACGG GCTGGCGAAT
TATCCCATCA CCCAGGGTTC CGACGCGCTG CGCGCCGCGA TCGCCGGCTG GGCCGCGCGC
CGCTATGGCG TCACGCTCGA TCCGGCGAGC GAGGTGCTGC CGGTCAACGG CTCGCGCGAA
GCCTTGTTCG CCTTCGCCCA GGCGGCTGTC GACTCGACCC GCCACGGTCG GCGCACGGTG
GTCTCGCCCA ACCCCTTCTA CCAGATCTAC GAAGGCGCGA CGCTGCTCGC CGGCGCCCGC
CCGTTCTTCC TCAACACGCT GCCCGAGAAC GGCTTCACGA TGGACTGGTC GCGCGTGCCG
GAAGACCTCT GGGACAGCAT CAGCCTCGTC TACGTCTGCT CGCCTGGCAA CCCCACCGGC
AAGGTCATGA CGCTCGACGA ATGGCGAACC CTGTTCGCGC TCGCCGACCG ACACGGCTTC
GTCATCGCCG CCGACGAATG CTATTCGGAG ATCTACTTCG ACGAGGCCCA TCCCCCGCTT
GGCGCGCTAA CAGCGTCGCA TCAACTGGGG CGCGGCTGCA GGAACCTCGT GGTCTTCAAC
TCGCTGTCCA AGCGCTCCAA CGTGCCCGGG CTGCGCTCGG GCATGGTCGC CGGCGACGCC
GAGGTGCTGA AGAAATTCCT GCTCTACCGC ACCTACCACG GCAGCGCGAT GAGCCCGGCC
GTGCAGGCGG CGAGCATCGC CGCGTGGAAC GACGAAGCCC ACGTCCTCGA CAACCGTCGC
CAGTACGCCG CGAAATTCGC CGCCGTCATA CCGCTGCTGC GCGACGTGCT GTCTTTCGAC
GCGCCCGACG CGGCCTTCTA TCTCTGGGCC CGCGTGCCCG GCGGCGACGA CGCCGCGTTC
GCGCGCGGCC TCTACGCGCA ACAGCACGTC ACTGTGCTGC CCGGCAGCTT CCTCGCGCGC
GACGCCGCCG GGGCCAACCC CGGCAAGGGC TTCGTGCGGA TCGCGCTGGT CGACACGCTC
GACGCCTGCG TCGAGGCCGC TGAACGCATC GCGGCCTTCG TCACCGAGGC CGCCTGA
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| Protein sequence | MNPRLDQLHP YPFQKLRELL AGTEPNPELA AINLSIGEPK HPTPGFIRDA LVGGLDGLAN
YPITQGSDAL RAAIAGWAAR RYGVTLDPAS EVLPVNGSRE ALFAFAQAAV DSTRHGRRTV
VSPNPFYQIY EGATLLAGAR PFFLNTLPEN GFTMDWSRVP EDLWDSISLV YVCSPGNPTG
KVMTLDEWRT LFALADRHGF VIAADECYSE IYFDEAHPPL GALTASHQLG RGCRNLVVFN
SLSKRSNVPG LRSGMVAGDA EVLKKFLLYR TYHGSAMSPA VQAASIAAWN DEAHVLDNRR
QYAAKFAAVI PLLRDVLSFD APDAAFYLWA RVPGGDDAAF ARGLYAQQHV TVLPGSFLAR
DAAGANPGKG FVRIALVDTL DACVEAAERI AAFVTEAA
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