| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1122 |
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| Symbol | |
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| ID | 3673193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1177570 |
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| End bp | 1178433 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637709805 |
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| Product | substrate-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | YP_314880 |
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| Protein GI | 74317140 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.583002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCGGC GGGGCATCCT CGCGCTGTGC CTGCTGCTCG CCGGGGTGAC GCACGCCGCC
CCGGTCCGCG TCGTCGACGA CGCCGGGCTC ACGCTGGAGC TTGCCCGAAC GCCGCAACGC
ATCGTTTCCC TGACGCCGCA CCTGACCGAG CTGTTGTTCG CGGTCGGCGC CGGCGAACAG
TTGGTGGGGG TCGACAGCGC GAGCGACTTC CCGGAAGCGG CACGCGGTCT GCCGCGCGTC
GGCGACTACA GCCGCGTCAG CTTCGAGCGC ATCCTCGCGC TCAAGCCTGA TCTCGTGCTT
GTCTGGCTCG GTGGCAATCG CCCGGTCGAC ATCCACGGCC TGAAAGCCAT GAAGCTGCCG
CTCCTGCATA CGCGTGCGGC GAAGCTCGAC GACGTCGCGC GCCTGCTGCG CCTGCTCGGA
CGGGCGAGCG GGCATCCAGT GCAAGGGGAG CGGGCGGCGC AACAGTTCGC GCAGCGGCTT
GCAGTGCTCG AGGAGCGCTA CGCAAGCAGG CGGCCGATCC CGGTCTTCTA CCAGGTATGG
GACCGCCCGT TGATGACGGT GGGCGGCGGG CACTGGATCA GTGAGGCGCT GACAGTGTGC
GGCGCGCGCA ACGTCTTCGC CGACCTGGCG GCGCTCTCGC CGGTGGTGTC GCGCGAGGCG
GTGCTGACGC GTGGGCCCGA AGTGATCGTC AGCGGCAGCG ACGCGCCGGC CGTCCGATCC
CAGTGGGAGC GCTATGCGGA ATTGCCGGCG GCCAGGACGG GCGCCTTTCT GCGGATAGAC
GCCGACCGGC TGCACCGCCC GAGCCCGCGT CTGCTCGACG GGGTCGTGCA GTTATGTGAG
GCGATCGCCC CTTACGGCCG CTGA
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| Protein sequence | MTRRGILALC LLLAGVTHAA PVRVVDDAGL TLELARTPQR IVSLTPHLTE LLFAVGAGEQ
LVGVDSASDF PEAARGLPRV GDYSRVSFER ILALKPDLVL VWLGGNRPVD IHGLKAMKLP
LLHTRAAKLD DVARLLRLLG RASGHPVQGE RAAQQFAQRL AVLEERYASR RPIPVFYQVW
DRPLMTVGGG HWISEALTVC GARNVFADLA ALSPVVSREA VLTRGPEVIV SGSDAPAVRS
QWERYAELPA ARTGAFLRID ADRLHRPSPR LLDGVVQLCE AIAPYGR
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