Gene Tbd_1107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1107 
Symbol 
ID3673178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1164776 
End bp1166104 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content62% 
IMG OID637709790 
Productputative ferredoxin 
Protein accessionYP_314865 
Protein GI74317125 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0158261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC GCGAAGGTAG CCTCGAAGCC CCGACCCGTC ATCCGCTCGA CTGGAAAAAC 
CCCGATTTCT ACGACGAAGA AAAATTTCTG CACGAGGCGG AGCGCGTCTT CGACATCTGT
CACGGCTGCC GCCGCTGCGT CTCGCTCTGC ACGGCGTTTC CGACCCTCTT CGACCTCGTC
GACGAATCGT CGACCATGGA GGTAGACGGG GTCGCCAAGA CCGATTACTG GAAGGTCGTC
GACGAGTGTT ATCTGTGCGA CCTCTGCTAC ATGACGAAGT GCCCCTACGT ACCGCCGCAT
CCGTGGAACC TCGACTTTCC GCACACGATG CTGCGCGGCA AGGCGATCAA GTTCAAGAAG
GGCGAGACGA TCTTCCGCGA CAAGCTCTTG TCGAGCACGG ACGCGATGGG CAAGCTCGCG
TCGATTCCGG TCGTCGTGCA GGCCGTCAAT GCCAGCCTCA GAAGCCGCCC GATCCGCAAG
ATCATGGACA GCGTGCTGAA GATCCATCCC GACCGCCGGC TGCCACATTA CGACAGCGCG
AAATTCCGCT CGACCGCGCA GCCGCGCAAT GAATTCGCGG TCAGGGACGG CGCGAAGACG
CCCGGCAAGG TCGCGATCTA CGCGACCTGT TACGTCAACT ACAACGAGCC CGGCATCGGC
CACGATCTGC TCAAGCTTCT CGCGCACAAC GAGGTTCCGA CCGTGCTCGT CGACAAGGAG
GCCTGCTGCG GCATGCCCAA GCTCGAACTG GGCGATCTCG ACGCGGTCGA GAAGCTCAAA
CAAATCAATG TTCCGCATCT GGCGAAGCTC GCGCGCGAAG GCTACGCGAT CCTGACGGCG
GTGCCTTCGT GCACGCTGAT GTACAAGCAG GAGTTGCCGC TGATGTTCCC GCACGACGCC
GAGGTGCAGG CGATCAAGGA GGCGATGTGG GACCCCTTCG AATACCTGAT GGCGCGCAAC
GCCGACGGCC TGTTGAAAAC CGATTTCACG ACGCCGCTCG GCAAGGTCGC CTACCACGTG
CCCTGTCATC AGCGCGTGCA GAACATCGGC AACAAGACCC GCGATGCGCT GCAGCTGGCG
GGGGCGGAGG TCAACATGGT CGAGCGTTGT TCGGGCCACG ACGGCACCTG GGGCGTGAAG
ACCGAGTTCT TCGACAAATC CATGAAGATC GGCAAGCCGG TATTCCGGCA GATGTCCGAG
CCCGCGCCGG ACTATGTGAG TTCGGACTGC GCGATCGCCG CGCGCCAGAT CATGCAGGGC
ATGGGCGAAA CCGCGGCGCA GAAAGAGCAT CCGATCACGC TCCTGCGCAT GGCCTACGGC
CTCGAATGA
 
Protein sequence
MSTREGSLEA PTRHPLDWKN PDFYDEEKFL HEAERVFDIC HGCRRCVSLC TAFPTLFDLV 
DESSTMEVDG VAKTDYWKVV DECYLCDLCY MTKCPYVPPH PWNLDFPHTM LRGKAIKFKK
GETIFRDKLL SSTDAMGKLA SIPVVVQAVN ASLRSRPIRK IMDSVLKIHP DRRLPHYDSA
KFRSTAQPRN EFAVRDGAKT PGKVAIYATC YVNYNEPGIG HDLLKLLAHN EVPTVLVDKE
ACCGMPKLEL GDLDAVEKLK QINVPHLAKL AREGYAILTA VPSCTLMYKQ ELPLMFPHDA
EVQAIKEAMW DPFEYLMARN ADGLLKTDFT TPLGKVAYHV PCHQRVQNIG NKTRDALQLA
GAEVNMVERC SGHDGTWGVK TEFFDKSMKI GKPVFRQMSE PAPDYVSSDC AIAARQIMQG
MGETAAQKEH PITLLRMAYG LE