Gene Tbd_1106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1106 
Symbol 
ID3673177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1164237 
End bp1164656 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID637709789 
Productputative oxidative stress related rubrerythrin protein 
Protein accessionYP_314864 
Protein GI74317124 
COG category[C] Energy production and conversion 
COG ID[COG1592] Rubrerythrin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00173749 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.749312 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCA AAGGTTCGAA AACCGAAGAA CATCTGAAGG CCGCATTTGC CGGCGAATCG 
CAGGCCAACC GCCGCTACCT CTACTTCGCA GCGAAGGCCG ACGTCGAAGG CTACAACGAC
GTCGCTGCCG TCTTCCGTTC GACCGCCGAA GGCGAAACCG GCCATGCCCA CGGCCATCTC
GAGTACCTCG AGAAGTGCGG CGACCCCGCG ACCGGCATGG CTTTCGGCCC CACCGCCGAC
AACCTGAAGA CCGCGATCGC CGGCGAGACG CATGAGTACA CCGACATGTA CCCGGGCATG
GCGAAGGACG CGCGCGGCGA AGGCTTCGAT GAGATCGCCG ACTGGTTCGA GACCCTGGCC
AAGGCAGAAC GCTCGCACGC CAACAAGTTC CAGAAGACCC TCGACAGCCT GGGTTCCTGA
 
Protein sequence
MQLKGSKTEE HLKAAFAGES QANRRYLYFA AKADVEGYND VAAVFRSTAE GETGHAHGHL 
EYLEKCGDPA TGMAFGPTAD NLKTAIAGET HEYTDMYPGM AKDARGEGFD EIADWFETLA
KAERSHANKF QKTLDSLGS