Gene Tbd_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1083 
Symbol 
ID3673776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1143199 
End bp1144113 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID637709766 
ProductABC transport system ATPase component 
Protein accessionYP_314841 
Protein GI74317101 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.323648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCG ATTACGCCAT CGACGTGCAG GGCCTGAGCA AATCCTTCGG CCGCAAACGC 
GTCGTCAACG ATCTGAGCCT GCGCGTCGAA GCGGGCGAGA TCTACGGTTT CCTGGGCCCC
AACGGCAGCG GCAAGACGAC CACCATCCGC ATGCTCTGCG GCCTGCTGAC CCCGGACGAA
GGCCAGGGCA CCTGCCTCGG CTTCGACGTG CTCCGGCAAA GCGCCGAGAT CAAGAAGCAG
GTCGGCTACA TGACCCAGCG CTTCAGCTTC TACGAGGACC TCACGATCCG CGAGAATCTC
GACTTCGTCG CGCGGCTCTA TGCGATGCCG GAACGCAAGC AGGCAGTCGA AGCCGGCATG
GAAGACCTGG GCCTCGCCGA TCGCGCGAAC CAGCTCGCGG GCACGCTTTC CGGTGGCTGG
AAGCAACGGC TCGCGCTGGC CGCGTGCATG CTCCATCGGC CCAAGCTCCT GCTGCTCGAC
GAACCGACGG CCGGCGTCGA CCCCAAGGCA CGGCGCGACT TCTGGGACGA AATCCACCGC
CTCGCCGGCC GCGGCATCAG CGCGCTCGTG TCGACCCACT ACATGGACGA AGCGGCGCGC
TGCCATCGCC TCGCCTATAT CGCGTTCGGC AACCTGCTCG CCTCCGGCAC GCCCGAAGAA
CTCATCGCCC AAAGCGGCCT CTCGACCTTT CTCGTGAAAG ACGACGACCC CGCGCTGGCA
CCGCGCCTTC GCGAATTGCC CGGGGTGCAG CAGGTCGTCG CGATGGGCAA CGTCTATAGC
GTGAGCGGCG AGGATGGGGC ATCGATCGAA CGCAGCCTCG CCGCCCTGCC GGCGCTGCGG
TTCGAGCGTG CCGAAACAGG GCTGGAACAG GTCTTCATCC GGCTCATGGA CACCGTGCAG
GACCCGCTGC CGTGA
 
Protein sequence
MSGDYAIDVQ GLSKSFGRKR VVNDLSLRVE AGEIYGFLGP NGSGKTTTIR MLCGLLTPDE 
GQGTCLGFDV LRQSAEIKKQ VGYMTQRFSF YEDLTIRENL DFVARLYAMP ERKQAVEAGM
EDLGLADRAN QLAGTLSGGW KQRLALAACM LHRPKLLLLD EPTAGVDPKA RRDFWDEIHR
LAGRGISALV STHYMDEAAR CHRLAYIAFG NLLASGTPEE LIAQSGLSTF LVKDDDPALA
PRLRELPGVQ QVVAMGNVYS VSGEDGASIE RSLAALPALR FERAETGLEQ VFIRLMDTVQ
DPLP