| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1046 |
|---|
| Symbol | |
|---|
| ID | 3673739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1110966 |
|---|
| End bp | 1112441 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637709729 |
|---|
| Product | Ppx/GppA phosphatase |
|---|
| Protein accession | YP_314804 |
|---|
| Protein GI | 74317064 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0248] Exopolyphosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.223703 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCT ACGACACGCT CGCCGCCGTC GACCTCGGTT CCAACTCCTT CCGCCTCGAA
GTGGCGCGCG TCGCAGGCGA CCAGCTGTAC CCCCTCGATT CGCTCAAGGA AACGGTGCGG
CTCGCGGCCG GCCTGCAGGA CGACAAGATT CTCGACGGTG CGGCGCGGGA ACGCGCGCTG
GCCTGCCTGA GGCGCTTCGG CGAGCGCCTG CGCGGCCTGC CCGCGGAAGC CGTACGCTGC
GTCGGCACCT CGACGCTGCG CGTCGCGCGC AACGCCGATG CCTTCCTCGC CGAGGCCGAG
GCGGCGCTCG GGCACCCGAT CGAGATCGTC GCCGGCCGCG AGGAGGCGCG CCTGATCTAC
CTCGGGGTCG CGCATTCGCT GCCGGCCTCT CCCGACCGCC GGCTCGTCGT CGACATCGGC
GGCGGCTCGA CCGAATTCAT CGTCGGCCAC GGCCTGAAGC CGCACGAGCG CGAAAGCCTG
CACCTCGGCT GCGTGCATTT CTCGCGGCGC TTTTTCGAGC AGGGGGCGGT CAGCCGCGCC
GCGCTCAAGG CCGCCGAACT GAGCGCGCGT GCGGAGGTCG AGCGCATCGC TCATGCCTTC
GGACGCGGCA ACTGGCAGCA GGCGGTCGGC TCGAGCGGCA CCGCGCGTGC GCTGCGCGAC
ATCCTCGAGC AAAGCGGCTG GTCGGCAGGC GGCATCACCC GCGACGGCCT CGACCGCCTG
CGCGATGCGC TGCTCGCGGC GGGCGACGTC GAGCGTCTCG AATTGCCCGG TCTTTCGCGG
GATCGCCGGC CGGTTATAGC CGGCGGCTTC GCGATCATGG CGGGACTGTT CGCCGAGCTC
GGAATCGAGC AGATGGACGT CGCCGAGACC GCCATGCGCG AGGGCATCCT CTACGATCTG
CTCGGCCGCT TTCACGCCGA CGACATGCGC GAGGCGACGG TCGCCGAATT CGCCCGTCGC
TATCACGTCG ACGCGGGCCA GGCCGAGCGC GTCGGACGCA CCGTGCTGAG GCTGTTCGCG
GCGACCGGGC GTGAAGACGA CAATGACGCC CGGGTTCTCG GCTGGGCCGC GCGCCTGCAC
GAGATCGGTC TGTCGGTCTC GCACAGCGGC TACCACCGCC ACTCGGCCTA CATCCTCGAA
AACGCCGACA TGCCGGGGTT TTCACGCACC GAACAGGCGC GGCTCGCGCT CCTAGCGCGG
GCGCAACGGG GCGCGCTGAC CAAGGTGGCG GCCGTTGCAG CGGGCGCCGT CGACGAGCGC
GACCGCCGCG CGATCTGGCT GCTGCGCCAG GCAGTGATTC TCTGCCGCAG CCGTGCCGAT
CCTCGCCTCG CCGAGGTCAG CGCCGAATCG ACGTCGAAGC GCTTCTGTCT GACGCTGCCT
CCGGGCTGGC TCGAGCAGCG GCCGCTCACG CAACGTGCGC TCGACGACGA GATCCAGCAC
TGGCAGGCGC TGGGGCTCAA GTACGTGCTC GGTTAA
|
|---|
| Protein sequence | MKSYDTLAAV DLGSNSFRLE VARVAGDQLY PLDSLKETVR LAAGLQDDKI LDGAARERAL
ACLRRFGERL RGLPAEAVRC VGTSTLRVAR NADAFLAEAE AALGHPIEIV AGREEARLIY
LGVAHSLPAS PDRRLVVDIG GGSTEFIVGH GLKPHERESL HLGCVHFSRR FFEQGAVSRA
ALKAAELSAR AEVERIAHAF GRGNWQQAVG SSGTARALRD ILEQSGWSAG GITRDGLDRL
RDALLAAGDV ERLELPGLSR DRRPVIAGGF AIMAGLFAEL GIEQMDVAET AMREGILYDL
LGRFHADDMR EATVAEFARR YHVDAGQAER VGRTVLRLFA ATGREDDNDA RVLGWAARLH
EIGLSVSHSG YHRHSAYILE NADMPGFSRT EQARLALLAR AQRGALTKVA AVAAGAVDER
DRRAIWLLRQ AVILCRSRAD PRLAEVSAES TSKRFCLTLP PGWLEQRPLT QRALDDEIQH
WQALGLKYVL G
|
|---|
| |