Gene Tbd_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1045 
Symbol 
ID3673738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1109731 
End bp1110969 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content66% 
IMG OID637709728 
Producthypothetical protein 
Protein accessionYP_314803 
Protein GI74317063 
COG category[R] General function prediction only 
COG ID[COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.211721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAACG CGCTGTGGGT CGGCTTCTTT TTCGTCGCCT TTCTGATCGC GCTCGCCAAT 
CTCGTTTTCC TCGGCAACGC CGAGATCTTC GCAGCACTGG TCAAGGCGCT GTTCGATAGC
AGCAAGGCCG CGTTCGAGAT CGCGCTCGGC CTGACCGGCG TGATGGCGCT GTGGCTCGGC
GTGATGAAGG TCGGCGAGCG GGCGGGCATG CTCGACCTGC TGACGCGCGG TCTCGCGCCG
CTGTTCCGGC GGCTGTTCCC CGAAGTTCCG CCCAATCATC CCGCGCTCGG CGCGATGACC
ATGAACATGG GCGCGAACAT GCTCGGGCTC GACAACGCGG CCACGCCGCT CGGCATCAAG
GCCATGCAGG AGCTGCAGAC GCTCAATCCT TCGAGCGACA CCGCGAGCGA CGCGCAGATC
CTGTTCCTCG TCATCAATAC CGCTTCGGTG ACGCTGCTGC CGGTGACGAT CTTCACCTAC
CGCGCGCAGC TCGGCGCGGC CGACCCGACC GACGTCTTCG TACCGCTTCT GATCACGACC
TACATCGGCA CCCTGACCGG TCTTTTTGTG ACCGGTCTTT TCCAGAAGCT GCATCTTTGG
AACCGTGTCA CCCTCGCTTA TCTCGGTGGC GCGACCGCGC TGGTCGGCGG GATGGTCGCC
TACTTCTCGA GCCTGGATGC GGCGGCGATG ACGCGGCAGT CGGCGATTCT CAGCAACGTG
CTGCTGTTCG GTGTCGTCGC CACGTTTCTC GCGATGGCCG CGTGGCGCCG CGTCAACGCT
TACGAAGCCT TCGTCGAAGG GGCCAAGGAA GGCTTCCGCA CGGCGGTCAC GATCATTCCC
TACCTCGTCG CGATGCTCGT CGCGATCGCC GTCTTTCGCG CCAGCGGCGC GCTCGACCTG
GCGATGTCGG CGATCCGCAG CGCCGTGCTC GCGCTCGGCT ACGACGCGCG CTGGGTCGAC
GCCCTGCCGA CCGCGTTGAT GAAGCCGTTC TCCGGCAGCG GCGCACGCGC GATGATGATC
GACACGATGC AGACCCACGG CGCCGACTCT TTCGCCGGCC GGCTCGCGTC GGTCGTGCAG
GGCAGCACGG AGACGACCTT CTACGTGCTC GCCGTCTATT TCGGCGCGGT CGGCATCCGC
CGTGTGCGCC ATGCCGTCGC CTGCGGGCTG ATCGCGGATG CCGCGGGGAT CGTCGCGGCG
ATCGGCATGG CCTATCTCTT TTTCGGAGCC GTTGCATGA
 
Protein sequence
MLNALWVGFF FVAFLIALAN LVFLGNAEIF AALVKALFDS SKAAFEIALG LTGVMALWLG 
VMKVGERAGM LDLLTRGLAP LFRRLFPEVP PNHPALGAMT MNMGANMLGL DNAATPLGIK
AMQELQTLNP SSDTASDAQI LFLVINTASV TLLPVTIFTY RAQLGAADPT DVFVPLLITT
YIGTLTGLFV TGLFQKLHLW NRVTLAYLGG ATALVGGMVA YFSSLDAAAM TRQSAILSNV
LLFGVVATFL AMAAWRRVNA YEAFVEGAKE GFRTAVTIIP YLVAMLVAIA VFRASGALDL
AMSAIRSAVL ALGYDARWVD ALPTALMKPF SGSGARAMMI DTMQTHGADS FAGRLASVVQ
GSTETTFYVL AVYFGAVGIR RVRHAVACGL IADAAGIVAA IGMAYLFFGA VA