Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1020 |
Symbol | |
ID | 3671245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1087980 |
End bp | 1088936 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709703 |
Product | hypothetical protein |
Protein accession | YP_314778 |
Protein GI | 74317038 |
COG category | [S] Function unknown |
COG ID | [COG4301] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR03438] probable methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.497946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00147567 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGGCCTTCG CCTTCCAGGA CTATCCCGCC GCCCACGACG ACGTGCGCGG CGAGGTCCTC GCGGGACTTG CCGCGCATCC GAAGGCAATT CCGCCGAAAT ATTTCTACGA TGCCGCCGGC TGCCGACTGT TCGACGCGAT CTGCGCACAG CCCGAATACA CGCTGTGCCG CACCGAGCAA AGTCTCATGG CGGCCCATCT GCCCGAGATC GCCGACGCCG TGGGCGAAGT CGACTGCATC ATCGAGCCCG GCGCAGGGGA CTGCGTCAAG GTGAGGCAGC TGCTTGGTGC GCTGCATCCG AAGAGCCTCG TCGTCATCGA CATCGCCGGC GCCCCCCTGG CGGCGGCTGC CGAAGCCGTC GCGCGCGACC ATCCCGGGCT CGCCGTGTCC GCCTTGTCGA TGGATTTTCT GCGCGATCTC GAAGCGGCCG CCCGGTGGCT CCCTTCGGGG CGGCGGCTCG TCTACTACCC GGGCTCGAGC ATCGGGAATT TCGAACCGGA AGCCGTGAAG GCCCTGCTCG CGCGCTTCCG CGACTTGGCT GGCCGGCAGG GACGGCTGCT CATCGGTTTC GACCTGAAGA AGGATCCGCT GCGGCTGCAC GCAGCGTACA ACGACGCGGC CGGGATGACC GCCGCGTTCA ACCTCAACCT GCTGACGCGG CTCAATCGCG AACTCGACGC CGATTTCGAC CTCGCGCGCT TTCGCCACTA TGCGTTCTAT CAGCCCGTGC GCGGCCGCGT CGAGATGCAT CTCGTCAGCC TCGCGGAACA GACGGTGCGG GTCGCGGGCG AATCCTTCCG CTTCGCGCTC GGCGAGACGC TGCATACCGA GCATTCGTAC AAATACCGCG GCGACGAATT CGCGGCGCTG GCCGAATCCG CAGGCTGGCA ATGCGCGCGG CACTGGGAGC ACGAGGGCTT CGCGGTGCAG TTGTATGGCG CATGCGAAAC CGGCTGA
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Protein sequence | MAFAFQDYPA AHDDVRGEVL AGLAAHPKAI PPKYFYDAAG CRLFDAICAQ PEYTLCRTEQ SLMAAHLPEI ADAVGEVDCI IEPGAGDCVK VRQLLGALHP KSLVVIDIAG APLAAAAEAV ARDHPGLAVS ALSMDFLRDL EAAARWLPSG RRLVYYPGSS IGNFEPEAVK ALLARFRDLA GRQGRLLIGF DLKKDPLRLH AAYNDAAGMT AAFNLNLLTR LNRELDADFD LARFRHYAFY QPVRGRVEMH LVSLAEQTVR VAGESFRFAL GETLHTEHSY KYRGDEFAAL AESAGWQCAR HWEHEGFAVQ LYGACETG
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