| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0990 |
|---|
| Symbol | |
|---|
| ID | 3671213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1056286 |
|---|
| End bp | 1057335 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637709671 |
|---|
| Product | ABC transporter, iron binding protein |
|---|
| Protein accession | YP_314748 |
|---|
| Protein GI | 74317008 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.599077 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACA ATCCCTTTCA CCCCAAGGAA ACGAAGATGA AATCGACGCT CACCCGGCTC
CTCTCCGTCG TAGCCCTCGG CCTCGCCTCG CTGCCTGCCC TGGCAGAGGA AGTCGTCGTC
TACTCGGCGC GCAACGAGCA GCTGATCAAG CCCCTGTTCG ACGCTTACAC GCGCGAGACC
GGCGTACAAG TCAAGTTCGT GACCGACAAG GAAGGCCCCC TGATGGCGCG CCTCAAGGCG
GAGGGCAAGA ACACGCCGGC CGACGTGCTG CTGACGGTCG ACGCCGGCAA CCTGTGGCAG
GCGTCGGAAG AAGGCCTGCT GCGCCCGATC AAGTCGAAGA CCCTGCAGAC CAACGTGCCG
GCCCACCTGC GCGACCCCGA CAACGAGTGG TTCGGCCTGT CGGTGCGCGC GCGCACGATG
GTCTACAACA CCGGCAAGGT GAAGCCCGGC GAATTGTCGA CCTATGAAGA CCTCGCCAAC
CCCAAATGGA AAGGCCGCCT CTGCCTGCGC ACCTCGAAGA AGGTCTACAA CCAGAGCCTG
GTCGCGATGA TGATCACCGA ATACGGCGAG GACAAGACCG AAGACATGGT GCGCGGCTGG
GTCGCCAACC TCGCGACCTC GCCCTTCCCC GACGACACCA AGGCAATGGA AGCCGTCGCC
GCCGGGCAAT GTGACGTCAC GCTCGTCAAC ACCTATTACT TCGGTCGCCT GATGGACAAG
AAGTCCGACC TGCCGCTCGC GATCTTCTGG CCGAACCAGA ATCTCAAGAA CAAGGCCGCC
GGCGTGCACG TCAACGTCTC GGGTGCCGGC GTCACACGCC ATGCGAGAAA CCCGGCGGGG
GCACAAAAGC TGATCGAGTG GCTGTCGTCG GAAAAGGCGC AGAACCAGTT CGCCGACGTC
AACCTCGAAT ACCCGGTCAA CCCGAAGGTC TCGCCCGACC AGAAGGTCGC CGCCTGGGGC
AACTTCAAGC AGAACCTCAT CAACGTGAAG GACGCTGGCA GCCTGCAGGC CAAGGCCGTA
AAATTGATGG ACCGCGCTGG CTACAAATAA
|
|---|
| Protein sequence | MPHNPFHPKE TKMKSTLTRL LSVVALGLAS LPALAEEVVV YSARNEQLIK PLFDAYTRET
GVQVKFVTDK EGPLMARLKA EGKNTPADVL LTVDAGNLWQ ASEEGLLRPI KSKTLQTNVP
AHLRDPDNEW FGLSVRARTM VYNTGKVKPG ELSTYEDLAN PKWKGRLCLR TSKKVYNQSL
VAMMITEYGE DKTEDMVRGW VANLATSPFP DDTKAMEAVA AGQCDVTLVN TYYFGRLMDK
KSDLPLAIFW PNQNLKNKAA GVHVNVSGAG VTRHARNPAG AQKLIEWLSS EKAQNQFADV
NLEYPVNPKV SPDQKVAAWG NFKQNLINVK DAGSLQAKAV KLMDRAGYK
|
|---|
| |