Gene Tbd_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0983 
Symbol 
ID3671206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1046077 
End bp1048290 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content69% 
IMG OID637709664 
Productadenylyl cyclase class-3/4/guanylyl cyclase 
Protein accessionYP_314741 
Protein GI74317001 
COG category[T] Signal transduction mechanisms 
COG ID[COG4252] Predicted transmembrane sensor domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCGGG TCTCGTCGAG GCTGCTTCAG GCGGGGCTGT CGGCGCTGTT CGTGCTGCTG 
ATCGCGGCGC ACGTCGGCGG CGCGCTCCAT TTCGATCCGA TCGAGCGCGT CGAGGCTTGG
CTTTACGACG CGTGGCTCAA GCGCACCGCG CCGACCGGGG CGGACGATCG CATCGCGATT
CTCGACATCG ACGAGGCGAG CCTGAAGAGC GTGGGCCGCT GGCCATGGAG CCGGGACACG
ATGACCGCGC TGGTCGAGCG CCTGTTCGAC CATTACGGCG TCGCAGCGGT CGGCTTCGAC
GTCGTCTTCG CCGAAGCCGA CCGCAGTTCC GGGCTCGATA CCTTGAAGGC GCTCTCGCAG
GGCGAGCTCG CAGGCGAGCG CGCGTTCGCT GCGGCGCTGC AGAAGATCGC GCCGCGCCTC
GACTACGACG CGCGGTTTGC CGAGGCGCTC GCGGAGCGGC CGGTGTCGCT CGGCTATTAC
TTCGTCCCCG AGGGATACCG TGCGACGCGC ACCGGTACGT TGCCCCCGTG GTCCCTGCCG
CCCGAGGTGT TCGGCGCGCT GAAGCCGGGC AGGCCGGCGG CCGGGTATGG CGCCAATCTC
GCGCCCTTCC AGGACGCGGC ACAGGGTGCG GGCTTCTTCA ACATGCTCGC CGACGACGAC
GGCACGGCCC GGCAGATGTC GCTCGTTCTC CCTTACGGCG AGGGCTATTA CCTTGCGCTC
TCGGCGTCGA CCCTGCGCAT CGCGTTCGGG GGCGACGCCG CGAGCGCCGG GGTCGAGCAA
AGCGAACTGC TCGGGCGCAA CTACCTCGCG CCGTGGCTCG AGGTCGGCGG CATTCGCGTG
CCGCTCGGCG CCGACGGCAC CGTGCACGTG CCCTACCGGG CGGGCTCGCC GTTTCCCTAC
ATCTCGGCGG CCGACGTGCT GGCTGGCAAA GCGCCGGTCG GGCAACTCGA GAATCGCATC
GTGCTCGTCG GCTCGACCGC GCCGGGGCTC GCCGATCTGC GCGTCACCCC GTTCTCCAGC
ACCTTTCCGG GCGTGGAGAT CCACGCCCAC CTGATCGCGG GCATGCTCGA CGGCACGACG
CGGGTGACGC CGCCGTGGGC GCGCGACGCG AGGCTGGCGG CGGTATTGCT GCTGGGCGCC
GTGCTGATCG TGGTGCTGCT GCGCTTCGGC CCGGCGCTCG GCCTCGCCGC GACGCTCGCG
TTGCTCGGCC TTCTGCTCGC CGCCTACGGC GCCGCGTGGG CGCGCTTCCA GGTGGTGCCG
ATGGCGGCGC CGATGCTCGC GGTGGCGGGG CTGTATGCGC TCAACACCGC GTACGGCCTT
TTCGCCGCGA CGCGCAGCAA GCGCCAGATC ACGCGGCTCT TCGGCCAATA CGTGCCACCC
GAACTCGCCG CCGAGATGAG CCGCGATCCC GCGCACTACA CGATGGAAGG GCAGTCGCGC
GACATGAGCG TCCTGTTCTC CGACATTCGC GGCTTCACCA ATTTTTCCGA AAAGCTGAGC
CCGACCGAGC TTTCCGAGGT GCTCAACGCC TATCTTTCGA CGATGACGCG CATCGTGCAG
CAGCATCAGG GCACGATCGA CAAGTACATC GGCGACGCCA TCATGGCGTT CTGGAATGCG
CCGGTCGATC TCGCGGACCA TGCCGCGCGC GCGGTCCGCA CAGCGCTCGA GATGCAGGCG
GCGCTGCCGC AGCTCAACGA CGAGTTCGCC GCGCGCGGCT GGCCGGCGGT GAAGATCGGC
GTCGGCGTCA ACACCGGGCG CATGAGCGTG GGCAACATGG GCTCGGAATT CCGCATGGCC
TACACCGTGA TGGGGGACGC GGTGAACCTC GGATCGCGCC TCGAGGGCAT CACCAAGCAG
TACGGCGTCG GCATCCTCGT CACCCAGTCG ACGGTCGACG CCGACCCGGT TCACGCCTAC
ATGAAGGTCG ACGAAGTCCG CGTCAAGGGC AAGGAGACGC CGGTCGCGAT CTATGAGCCG
CTCGGGGCAA AAGACCGCCT CGCCGACGAC GTGCGCAGCG CCGCCGCCGC CTTCGACGCC
GCCTTCGCCG CGTATCAGAA GCAGGACTGG GACGCTGCCG AGACGGCCCT GCGCGCGCTT
GACGCGAAGT CGCCGCGCGC GTTGTACGAT GTCTATCTTG AGCGCATCGC GCAGTTCCGC
GCCGCGCCTC CGCCGCAAGG CTGGGACGGC GTCTACGTCT ACACAACGAA ATAA
 
Protein sequence
MTRVSSRLLQ AGLSALFVLL IAAHVGGALH FDPIERVEAW LYDAWLKRTA PTGADDRIAI 
LDIDEASLKS VGRWPWSRDT MTALVERLFD HYGVAAVGFD VVFAEADRSS GLDTLKALSQ
GELAGERAFA AALQKIAPRL DYDARFAEAL AERPVSLGYY FVPEGYRATR TGTLPPWSLP
PEVFGALKPG RPAAGYGANL APFQDAAQGA GFFNMLADDD GTARQMSLVL PYGEGYYLAL
SASTLRIAFG GDAASAGVEQ SELLGRNYLA PWLEVGGIRV PLGADGTVHV PYRAGSPFPY
ISAADVLAGK APVGQLENRI VLVGSTAPGL ADLRVTPFSS TFPGVEIHAH LIAGMLDGTT
RVTPPWARDA RLAAVLLLGA VLIVVLLRFG PALGLAATLA LLGLLLAAYG AAWARFQVVP
MAAPMLAVAG LYALNTAYGL FAATRSKRQI TRLFGQYVPP ELAAEMSRDP AHYTMEGQSR
DMSVLFSDIR GFTNFSEKLS PTELSEVLNA YLSTMTRIVQ QHQGTIDKYI GDAIMAFWNA
PVDLADHAAR AVRTALEMQA ALPQLNDEFA ARGWPAVKIG VGVNTGRMSV GNMGSEFRMA
YTVMGDAVNL GSRLEGITKQ YGVGILVTQS TVDADPVHAY MKVDEVRVKG KETPVAIYEP
LGAKDRLADD VRSAAAAFDA AFAAYQKQDW DAAETALRAL DAKSPRALYD VYLERIAQFR
AAPPPQGWDG VYVYTTK