Gene Tbd_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0969 
Symbol 
ID3672763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1032291 
End bp1033520 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID637709650 
Productaspartate kinase 
Protein accessionYP_314727 
Protein GI74316987 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0527] Aspartokinases 
TIGRFAM ID[TIGR00656] aspartate kinase, monofunctional class
[TIGR00657] aspartate kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCA TCGTACAAAA GTACGGCGGC ACCTCGGTCG CCAACGTCGA ACGCATCCGC 
GCCGTGGCCG AACGCGTCGC CAAGTTCAAA ATGCTCGGCC ACCAGGTCGT GGTCGTGCTC
TCGGCGATGT CGGGCGAAAC CAACCGCCTG ATCGGCCTCG CCAAACAGAT CCAGGCCGAA
CCCGACCCGC GCGAGCTCGA CATGATGGTG TCGACTGGCG AGCAGGTCAC GATCGCGCTG
CTCGCGATGG CGCTCAAGGA TCTCGGCCTC AAGGCGAAGA GCTACACCGG CGCCCAGGTG
CGCATCCTCA CAGACGACGC CTTCACCAAG GCCCGCATTC TCAGCATCGA CGAGGCCAAG
ATGCGGCGCG ACCTCGACTC GGGTCACGTC GTCGTCGTCG CGGGCTTCCA AGGCGTCGAC
GAGGGCGGCA ACATCACGAC CTTGGGACGG GGCGGCTCTG ACACCACCGG CGTCGCGCTC
GCGGCCGCGC TCAAGGCCGA CGAATGCCAG ATCTATACCG ACGTCGACGG CGTCTATACG
ACCGACCCAC GCATCGTCCC CGAAGCACGG CGGCTGAAGA CCGTGACGTT CGAGGAAATG
CTCGAAATGG CGAGCCTCGG CTCCAAGGTG CTGCAGATCC GCTCGGTCGA GTTCGCAGGC
AAGTACAAGG TCAAACTGCG CGTGCTGTCG AGCTTTCAGG ACGAAGGCGA CGGCACGCTC
ATCACATTCG AGGAAAACGA CAACATGGAA CAGGCCATCA TCTCGGGCAT CGCCTTCAGC
CGTGACGAAG CGAAGATCAC TGTCGTCGGC GTGCCGGACC ATCCGGGCAT CGCCTATCAG
ATTCTTGGCC CCGTCGCCGA CGCCAACGTC GACGTCGACA TGATCGTGCA GAACGTCGGT
CACGCCAACA CCACCGACTT CACCTTCACC GTGCACCGCA ACGACTTCGC CAAGGCGATG
AGCCTCGTCA AGGCGACCGC CGCGACGGTC GGCGCACGCG AAGTCACCGG TGACGACAAG
ATCGCCAAGG TGTCGATCGT CGGTGTCGGC ATGCGCTCGC ACGTCGGCAT CGCGAAAAAG
ATGTTCGAGA CGCTGTCGAA GGAAAACATC AACCTGCAGA TGATCTCGAC CTCCGAGATC
AAGATCTCGG TCGTGGTCGA GGACAAGTAC CTCGAACTCG CCGTGCGCGC GCTGCACCAG
GCCTTCGAAC TGGACAAGGC GACGGCCTGA
 
Protein sequence
MALIVQKYGG TSVANVERIR AVAERVAKFK MLGHQVVVVL SAMSGETNRL IGLAKQIQAE 
PDPRELDMMV STGEQVTIAL LAMALKDLGL KAKSYTGAQV RILTDDAFTK ARILSIDEAK
MRRDLDSGHV VVVAGFQGVD EGGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT
TDPRIVPEAR RLKTVTFEEM LEMASLGSKV LQIRSVEFAG KYKVKLRVLS SFQDEGDGTL
ITFEENDNME QAIISGIAFS RDEAKITVVG VPDHPGIAYQ ILGPVADANV DVDMIVQNVG
HANTTDFTFT VHRNDFAKAM SLVKATAATV GAREVTGDDK IAKVSIVGVG MRSHVGIAKK
MFETLSKENI NLQMISTSEI KISVVVEDKY LELAVRALHQ AFELDKATA