| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0959 |
|---|
| Symbol | |
|---|
| ID | 3672751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1020983 |
|---|
| End bp | 1022167 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637709638 |
|---|
| Product | tetratricopeptide repeat protein |
|---|
| Protein accession | YP_314717 |
|---|
| Protein GI | 74316977 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.214004 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG AATTCTGGTG GCTGCTCGCG TTTCCGCTCT TTTTCGCCCT CGGCTGGATC
GCGGCCCGGG TCGACATCCG GCAGGTCGTC ACCGAATCGC GGGCGCTGCC CAACTCGTAT
TTCCGCGGCC TCAATTTCCT GCTCAATGAG CAGCCGGACA AGGCCATCGA GGCGTTTCTG
GAAGTCGTCA AGCTCGAGCC CGAGACCATC GATTTGCATT TTGCGCTGGG CGGACTGTTC
CGGCGCCGCG GCGAATTCGA CCGCGCCATC CGCATGCACG AGCACCTGCT CGAGCGCGAA
TATCCTCAGG GTCACAAAGG GCTCGCCGAG GAGCAGCGCC TGCGGGCGAT GAGCGAGCTG
GGCCAGGACT ACCTCAAGGC CGGCCTGCTC GATCGCGCCG AGCAGGTGTT CGGCAAGCTG
CTCGAGACCT CCCAGCACGG GCAGGCGCGC ACGCATCTGC TCGAAATCTA CGTGCAGGAA
AAGGACTGGC AGAAAGCGAT CGACGCGGCG CGCCTGCTCG AGCGCGACAC GAGCAAGCCG
CTGAACGCGG ATATCGCGCA CTTTTATTGC GAGCTCGCCC TGCTCGAGTC AGCCAAGGGC
AATTCGGACG CCGCAGCAGC GCAGCTGCAG CAGGCGCTCG CCGCGAACCG CCAGTCGGTG
CGCGCGAACC TGATGACGGG CGACCTGCAC GCCGCGGCCG GGCGGCACGA AGCGGCGATC
GCGGCGTGGC GTCTGGTCGA GACCCAGAGC GCGGGTCACA TGGCGCTCGT CGTCGACCGC
GTGCTCGGGA GCTATCGCCA GCTTGGGCGC GTCGGCGAGG GCGTGCAGTG GCTCCGCGCC
TTCTATGCGC GGCAGCCTTC GCACGATGTT TTCAACGCCT TGTATCTGGC GGTGTCCGAG
ACCGAAGGGG CGGCGGCCGC GCGCCAACTC GCACGAGAGG AACTGCGCCG CAACCCGAGC
CTGCGCACGC TCGATCGCCT GCTCGAGGCC GAAATCGTCA CGGCAGACCC CGAGCAGCGT
GAGCTGTTGC AGGTGGAAAA GAGCCTCGTC GCCTCGTACA GCCAGCGCAT GATGCGCTAC
CAGTGCGGCA GCTGCGGCTT CAAGGCCAAG CAATTCTTCT GGCGTTGTCC GGCGTGCGGG
CGCTGGGACA GCTTCGATCC CGAGCGCGGC GAAGGCGAGA GCTAG
|
|---|
| Protein sequence | MEFEFWWLLA FPLFFALGWI AARVDIRQVV TESRALPNSY FRGLNFLLNE QPDKAIEAFL
EVVKLEPETI DLHFALGGLF RRRGEFDRAI RMHEHLLERE YPQGHKGLAE EQRLRAMSEL
GQDYLKAGLL DRAEQVFGKL LETSQHGQAR THLLEIYVQE KDWQKAIDAA RLLERDTSKP
LNADIAHFYC ELALLESAKG NSDAAAAQLQ QALAANRQSV RANLMTGDLH AAAGRHEAAI
AAWRLVETQS AGHMALVVDR VLGSYRQLGR VGEGVQWLRA FYARQPSHDV FNALYLAVSE
TEGAAAARQL AREELRRNPS LRTLDRLLEA EIVTADPEQR ELLQVEKSLV ASYSQRMMRY
QCGSCGFKAK QFFWRCPACG RWDSFDPERG EGES
|
|---|
| |