| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0954 |
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| Symbol | |
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| ID | 3672746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1016479 |
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| End bp | 1017765 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637709633 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_314712 |
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| Protein GI | 74316972 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00202583 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTC TCGATTTGCC CGGACGCAGC CGGGCCAGCG GCACCGTGCG CTTGCCGGGT
TCGAAAAGCA TTTCCAACCG CGTACTGCTG CTCGCCGCGC TGGCCGAGGG CGTGACCGAC
GTTTACGACG TGCTCGATTC GGACGACACG CGCTACATGC TGGCGGCGCT GCAGGCGCTC
GGTGTCGGCG TCGAGGATCG CGGCGACAAC CACTGGCGGG TCACCGGCGT CGCCGGGGCG
TTTCCGGCGC GCCAGGCCGA GCTCTTCCTC GGTAACGCCG GCACCGCGTT CCGGCCGCTG
ACGGCCGTGC TCGCGCTGTC GGGCGGCGAC TACGTCCTCG ACGGCGTCGC ACGCATGCAC
GAGCGCCCGA TCGGTGACCT CGTCGACGCG TTGCGCCAGT TGGGTGGGCG GATCGATTAT
CGCGGCACGC TCGGCTTCCC ACCGCTGCAT GTCCATCCCC CGCAGGCCGG GGCGGACGTG
GCCCACATCC GCGGAAACGT CTCGAGCCAG TTTCTGACCG GCCTTCTCAT GGCCTTGCCG
CTCAGGCGGC TTCGCACACG CGTCGAGGTC GTCGGCGAGC TGATCTCCAA GCCCTACATC
GAAATCACGC TCGCGATGCT GCGCCGCTTC GGCGTCGAGG TGGCGCGCGA CGGCTGGCAG
GCCTTTTCGG TCGCCGCGGA CGCCTGCTAT CGCAGTCCGC GCGAAATCTA CGTCGAGGGC
GACGCCTCGT CGGCATCGTA CTTTTTGGCC GCTGGCGCGA TCGGCGGCGG TCCGGTCCGC
GTCGAGGGCG TGGGGCGCGA CAGCGTCCAG GGTGACGTCG GTTTCGCCGA CGCACTGGCT
GCGATGGGCG CGCGGATCGC GATGGGACCG AACTGGATCG AAGCCTGCGC GCCAGCGCAG
GGGCGTCTCA AGGCGATCGA CCTCGATTGC AACGCGATCC CAGACGCCGC GATGACGCTC
GCCGTCGCGG CCTTGTTCGC CGACGGCACG ACGACGCTGC GAAACATCGC AAGCTGGCGC
GTCAAGGAGA CCGACCGCAT CGCGGCGATG GCGACCGAAC TGCGCAAGGT CGGCGCGACG
GTCGAGGAGG GTGACGACTT CCTGCGCGTC ACGCCGCCGG AAACCCTGCG CGCGGGCGCC
GTTATCGACA CCTACGACGA CCATCGCATG GCGATGTGCC TGTCGCTCGT GTCGCTCGGC
GGTGTCGCCG TCCGCATCAA CGACCCGGGC TGCGTCGCCA AGACCTTCCC CGGTTACTTC
AACGCCTTTG CGGAGATCGC GCGATGA
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| Protein sequence | MEFLDLPGRS RASGTVRLPG SKSISNRVLL LAALAEGVTD VYDVLDSDDT RYMLAALQAL
GVGVEDRGDN HWRVTGVAGA FPARQAELFL GNAGTAFRPL TAVLALSGGD YVLDGVARMH
ERPIGDLVDA LRQLGGRIDY RGTLGFPPLH VHPPQAGADV AHIRGNVSSQ FLTGLLMALP
LRRLRTRVEV VGELISKPYI EITLAMLRRF GVEVARDGWQ AFSVAADACY RSPREIYVEG
DASSASYFLA AGAIGGGPVR VEGVGRDSVQ GDVGFADALA AMGARIAMGP NWIEACAPAQ
GRLKAIDLDC NAIPDAAMTL AVAALFADGT TTLRNIASWR VKETDRIAAM ATELRKVGAT
VEEGDDFLRV TPPETLRAGA VIDTYDDHRM AMCLSLVSLG GVAVRINDPG CVAKTFPGYF
NAFAEIAR
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