| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_0909 |
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| Symbol | |
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| ID | 3672700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 964560 |
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| End bp | 966695 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637709588 |
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| Product | putative TonB-dependent receptor |
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| Protein accession | YP_314667 |
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| Protein GI | 74316927 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.622893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CATCCATCGC GCTCGCGCTC GCGGGCGTCA TCGCGGCGCC GGCCGCGTCC
GCCGCCGCGC CCGCCGACGC GGCGCTTCCG GAAATGACCG TGACCGGGAC GCGCGAGGGC
GAACTCCTGA GCGAGACGCC GGCGACCGTC GGCATCGTCA AGGACACGAC GCTGCGCGAA
ACGCGGCCGA CCCACCCCAA GGAGGTCCTC AATCAGGTGC CGGGCGTCTG GGTCAGCAAT
CTTTCCGGCG AGGGGCACTC GACCGCGATC CGCCAGCCGC TGACGACGAG CGCGGTCTAC
CTCTACCTTG AGGACGGCAT TCCGACGCGC TCGACCGGCT TCTTCAACCA CAACGCGCTG
TACGAGATCA ACGTCCCGCA GGCTGGCGGC ATGGAAATCA TGAAAGGCCC GGGCAGCGCG
CTCTACGGCT CGGACGCGAT CGGCGGCACG ATCAACGTGC TGACCCGCAC GCCGCCCACC
AAGGCCGAAT TCGAGGCCAG CGCCGAAGCC GGCTCGCACG GCTGGGGGCG CGTGCTCGTC
GGCGGCGGCA ATGCGCACGG CGACGACGCC TGGCGCGCGA GCCTCAACCT CACGCGCACC
GACGGCTGGC AGGACAACGC CGGCTACGAC CGCCAGACCG GCACCGCGCG CTGGGACCGT
CTGCTCGGCG ACGACGCGCT GCTGAAAACG GTGCTGTCGT TCTCCAAGGT CGACCAGCAG
CACGTCGGCA AGCTGAGCGC GGGCGAACTC GAGGCGACGC CGCGTGCCAA CAACGTACCG
TTCTCGTACC GCGAGGTCGA CGCCTTCCGG CTGTCGACCG CCTACGAAAA GGAAACCGCC
AACAGCCTGC TGTCGATCAC GCCCTACTTC CGCGACAACA GCATGGACAT CCTTCCCAAC
TGGAGCGTCA GTTACGACCC GAGCCGCTAC CTCACGAAGA ACAAGTCCTT CGGCTTGCTC
GGCAAATACC GCCGCGACTT CGAGCCGCTG CGCGCTCGGC TCATCGTCGG CCTGGATTTC
GACTACAGCC CGGGGTCGCG CGACGAGGAT TCGATTCGTC TCGACAAGAC CACCAATGCC
TACGGCGGCG TGACCTATAG TCTCAATCCC GCGGCACCCG TGCAGATCTA CGACTACGAC
GTCAGCTACC GTGGCATTTC GCCCTACGTG CACGGCGAGG CCTCGCTGAC CGAACGCCTG
CGCGTCAACG CCGGCCTGCG CTACGACGAC ATGCGCTACG ACTACGAGAA TAACTTCAAC
GGCGGCGTCG CCGGTGCCAC GCAAGGCGTC GCCGGGCCGT TCCCGGCCGG GGGCTGGTAC
GGCCACGTCG CCAGCACCGA GGTCGGCTAT ACACACTGGG GGCCGAAGCT CGGCGCGACC
TATGCGTTCA GCGAGGCGCT GAGCGGCTTC GCGGCCTACA GCAATTCCTT CCGCGCGCCG
TCCGAGAGCC AGGTCTTCCG CGGCAGCCGC GAGTCCACCG CGGCGAAGGC GCAGGCCGCC
GCCGAGTCGC TGCTGGATCT CAAGCCCGTG ATCGTCGACA ACTACGAACT CGGCCTGCGT
GGCAAGGCCG GCACCGTGCG CTACGAGGCC TCGGTCTATC ACATGGTCAA GAAGGACGAC
ATCGTGAGCT ATACCGACCC GGCCACGACG CAGAGAACCG TCGTCAACGC CGGTGAAACG
CTGCACCGCG GCGTCGAGCT CGGACTCGGC CTGCCGCTCG CGCCGGCCTG GCAGCTCGAT
GCGAGCCTCT CTTATGCCAA GCACACCTAC GAGTCGTGGA CCGTGTCGGG AACCGCCGAC
TACAGCGGCA ACGAAATGGA AGCCGCGCCG CGCCTGATCG CCAACACGCG TCTGAGCTAC
GCCCCCGGCT TCATGAACGG CGGGCGCGTG CAGCTCGAAT GGTTCCGCCT CGGCAGCTAC
TGGCTCGACG CCGCGAACAC CGGCAAATAC GACGGCCACG ACCTTTTCAA CCTGCGCGCC
AACTACCCGT TCGGCAAGGG CATGGAAGTG TTCGGCAGCA TCACCAACCT GTTCGACAAG
CGCTATGCCG AGACCGCCGA CGGCACCGGC ACCGCGCCGA CCTATACGGC CGGGCTGCCG
CGCTCGGCGG TCGTCGGCGT GCAGGCGAAG TGGTGA
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| Protein sequence | MKLTSIALAL AGVIAAPAAS AAAPADAALP EMTVTGTREG ELLSETPATV GIVKDTTLRE
TRPTHPKEVL NQVPGVWVSN LSGEGHSTAI RQPLTTSAVY LYLEDGIPTR STGFFNHNAL
YEINVPQAGG MEIMKGPGSA LYGSDAIGGT INVLTRTPPT KAEFEASAEA GSHGWGRVLV
GGGNAHGDDA WRASLNLTRT DGWQDNAGYD RQTGTARWDR LLGDDALLKT VLSFSKVDQQ
HVGKLSAGEL EATPRANNVP FSYREVDAFR LSTAYEKETA NSLLSITPYF RDNSMDILPN
WSVSYDPSRY LTKNKSFGLL GKYRRDFEPL RARLIVGLDF DYSPGSRDED SIRLDKTTNA
YGGVTYSLNP AAPVQIYDYD VSYRGISPYV HGEASLTERL RVNAGLRYDD MRYDYENNFN
GGVAGATQGV AGPFPAGGWY GHVASTEVGY THWGPKLGAT YAFSEALSGF AAYSNSFRAP
SESQVFRGSR ESTAAKAQAA AESLLDLKPV IVDNYELGLR GKAGTVRYEA SVYHMVKKDD
IVSYTDPATT QRTVVNAGET LHRGVELGLG LPLAPAWQLD ASLSYAKHTY ESWTVSGTAD
YSGNEMEAAP RLIANTRLSY APGFMNGGRV QLEWFRLGSY WLDAANTGKY DGHDLFNLRA
NYPFGKGMEV FGSITNLFDK RYAETADGTG TAPTYTAGLP RSAVVGVQAK W
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