Gene Tbd_0784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_0784 
Symbol 
ID3673833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp827495 
End bp828304 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content66% 
IMG OID637709462 
Productmethionine aminopeptidase 
Protein accessionYP_314542 
Protein GI74316802 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0024] Methionine aminopeptidase 
TIGRFAM ID[TIGR00500] methionine aminopeptidase, type I 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.214544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCT CCATCAAAAC CGGCGCCGAC ATCGACAACA TGCGCGTCGC CGGCCGCCTC 
GCCTCCGAAG TGCTCGACTA CATCACGCCC TTCGTCAAAC CCGGCGTCAC GACCGGCGAA
CTCGACCGGC TATGCCACGC GTACATGGTC GACGTTCAAG GCACCGTGCC GGCGCCGCTG
AACTACGCGC CCTCGGGCCA TGCGCCCTAC CCCAAATCGA TCTGCACTTC GGTGAACAAC
CAGGTCTGCC ACGGGGTGCC GGGCGACAAG GTGCTGAAGA ACGGCGACAT CGTCAACCTC
GACATCACGG TCATCAAGGA CGGGTGGCAC GGCGATACGA GCCGCATGTT CGCGGTCGGT
GAGGCGACGA TCCAGGCCAG GCGGCTGATC CAGATCACCT ACGAGGCGAT GTGGGTCGGC
ATCGACCGGG TGAAGCCCGG CGCGCGCCTC GGCGACATCG GCCACGCGAT CCAGCGTTTC
GCCGAGAACC ACGGCTACAG CGTGGTGCGC GAGTTCTGCG GCCACGGCAT CGGCCGCAAT
TTCCACGAGG AACCGCAGGT CCTGCATTAC GGCAAGGCCG GAACCGGCTT GCTGCTCGAA
CCCGGCATGA CCTTCACGAT CGAGCCGATG ATCAACGCGG GCCGGCGCGA CATCCGGCAG
ATGCCGGACG GCTGGACGAT CGTGACCAAG GACCGCAGCC TGTCCGCGCA ATGGGAACAC
ACCGTGCTCG TCACCGACAG CGGCTACGAG GTGCTGACCG TGTCGGCGGG CACGCCGGCC
GTGCCCGACC GCATACTTCA CCCGGCGTGA
 
Protein sequence
MTVSIKTGAD IDNMRVAGRL ASEVLDYITP FVKPGVTTGE LDRLCHAYMV DVQGTVPAPL 
NYAPSGHAPY PKSICTSVNN QVCHGVPGDK VLKNGDIVNL DITVIKDGWH GDTSRMFAVG
EATIQARRLI QITYEAMWVG IDRVKPGARL GDIGHAIQRF AENHGYSVVR EFCGHGIGRN
FHEEPQVLHY GKAGTGLLLE PGMTFTIEPM INAGRRDIRQ MPDGWTIVTK DRSLSAQWEH
TVLVTDSGYE VLTVSAGTPA VPDRILHPA